Job Description P30860 Confidence 97.41% Date Thu Jan 5 11:46:37 GMT 2012 Rank 54 Aligned Residues 185 % Identity 11% Template d1zbma1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.30

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	A	E	C	T	F	T	N	H	A	F	D	S	L	I	P	S	L	K	F	R	K	Y	D	A	V	I	S	G	M	D	I	T	P	E	R	S	K	Q	V	S	F	T	T	P	Y	Y	E	N	S	A	V	V	I	A	K	K	D	T	Y	K	T	F	A	D	L	K	G	K	R	I	G	M	E	N	G	T	T	H
Query Conservation
Alig confidence																																															.
Template Conservation																																															.
Template Sequence		T	W	L	E	I	E	H	V	I	E	D	I	E	T	L	N	R	K	A	F	N	A	E	Y	E	V	T	A	I	S	A	H	A	Y	A	L	L	D	D	K	Y	R	I	L	S	.	A	G	A	S	V	G	D	G	Y	G	P	V	V	V	A	K	S	E	I	S	L	D	G	K	R	I	A	V	P	G	R	Y	T	T
Template Known Secondary structure			S																	G	G	G	T			S										T	T	S	T	T	T					S	.	S						S	S								S	S					T	T						S		T	T	S
Template Predicted Secondary structure																																															.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.		.	.
Predicted Secondary structure																																																																						.	.								.
Query SS confidence																																																																						.	.								.
Query Sequence		Q	K	Y	I	Q	D	Q	H	P	E	V	K	T	V	S	Y	D	S	Y	Q	N	A	F	I	D	L	K	N	G	R	I	D	G	V	F	G	D	T	A	V	V	N	E	W	L	K	T	N	P	Q	L	G	V	A	T	E	K	V	T	D	P	Q	Y	F	G	T	G	L	.	.	G	I	A	V	R	P	D	.	N	K
Query Conservation																																																																						.	.								.
Alig confidence																																																																						.	.								.
Template Conservation
Template Sequence		A	N	L	L	L	K	L	A	V	E	D	F	E	P	V	E	X	P	F	D	R	I	I	Q	A	V	L	D	E	E	V	D	A	G	L	L	I	H	E	G	Q	I	T	Y	A	D	Y	G	L	K	C	V	L	D	L	W	D	W	W	S	E	Q	V	K	L	P	L	P	L	G	L	N	A	I	R	R	D	L	S	V
Template Known Secondary structure											S	S								G	G	G							T	T	S	S	S						S	G	G	G	G	T	G	G	G	G	T													T	T		S	S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		A	L	L	E	K	L	N	N	A	L	A	A	I	K	A	D	G	.	.	.	.	.	T	Y	Q	K	I	S	D	Q	W	F	P	Q
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.
Template Conservation
Template Sequence		E	V	Q	E	E	F	L	R	A	X	R	E	S	I	A	F	A	I	E	N	P	D	E	A	I	E	Y	A	X	K	Y	S	R	G
Template Known Secondary structure																					S									G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions