Job Description P30860 Confidence 100.00% Date Thu Jan 5 11:46:37 GMT 2012 Rank 15 Aligned Residues 218 % Identity 28% Template d1wdna_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.94

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	N	F	G	V	S	A	T	Y	P	P	F	E	S	I	G	A	N	N	E	I	V	G	F	D	I	D	L	A	K	A	L	C	K	Q	M	Q	A	E	C	T	F	T	N	H	A	F	D	S	L	I	P	S	L	K	F	R	K	Y	D	A	V	I	S	G	M	D	I	T	P	E	R	S	K	Q	V	S	F	T
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		K	L	V	V	A	T	D	T	A	F	V	P	F	E	F	K	Q	.	G	D	L	Y	V	G	F	D	V	D	L	W	A	A	I	A	K	E	L	K	L	D	Y	E	L	K	P	M	D	F	S	G	I	I	P	A	L	Q	T	K	N	V	D	L	A	L	A	G	I	T	I	T	D	E	R	K	K	A	I	D	F	S
Template Known Secondary structure									S	S	B	T	T	T	B				.	T	T				S														T										G	G	G							T	T	S	S	S														T	T	S
Template Predicted Secondary structure																			.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		T	P	Y	Y	E	N	S	A	V	V	I	A	K	K	D	.	.	T	Y	K	T	F	A	D	L	K	G	K	R	I	G	M	E	N	G	T	T	H	Q	K	Y	I	Q	D	Q	H	P	E	V	K	T	V	S	Y	D	S	Y	Q	N	A	F	I	D	L	K	N	G	R	I	D	G	V	F	G	D	T	A	V	V	N
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		D	G	Y	Y	K	S	G	L	L	V	M	V	K	A	N	N	N	D	V	K	S	V	K	D	L	D	G	K	V	V	A	V	K	S	G	T	G	S	V	D	Y	A	K	A	N	I	K	T	K	D	L	R	Q	F	P	N	I	D	N	A	Y	M	E	L	G	T	N	R	A	D	A	V	L	H	D	T	P	N	I	L
Template Known Secondary structure		S													T	T			S		S	S	S	T	T	T	T	T							T	T	S													S						S	S										T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	L	K	T	N	P	Q	L	G	V	A	T	E	K	V	T	D	P	Q	Y	F	G	T	G	L	G	I	A	V	R	P	D	N	K	A	L	L	E	K	L	N	N	A	L	A	A	I	K	A	D	G	T	Y	Q	K	I	S	D	Q	W	F	P	Q
Query Conservation
Alig confidence											.	.	.
Template Conservation											.	.	.
Template Sequence		Y	F	I	K	T	A	G	N	G	.	.	.	Q	F	K	A	V	G	D	S	L	E	A	Q	Q	Y	G	I	A	F	P	K	G	S	D	E	L	R	D	K	V	N	G	A	L	K	T	L	R	E	N	G	T	Y	N	E	I	Y	K	K	W	F	G	T
Template Known Secondary structure						T	T	T	T	T	.	.	.	T																			T	T																		T	S											S	S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions