Job Description P30860 Confidence 49.94% Date Thu Jan 5 11:46:37 GMT 2012 Rank 97 Aligned Residues 175 % Identity 9% Template d1ve4a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.20

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60													.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	G	F	D	I	D	L	A	K	A	L	C	K	Q	M	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	E	C	T	F	T	N	H	A	F	D	S	L	I	P	S	L	K	F	R	K	Y	D	A	V	I	S	G	M	D	I	T	P	E	R	S	K	Q	V	S	F	T	T	P	Y	Y	E	N	S	A	V
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	G	R	M	F	R	E	A	Y	E	V	L	K	R	A	G	L	D	L	P	E	V	L	L	H	G	K	E	G	G	V	A	L	L	E	L	R	N	K	D	V	P	I	Y	V	D	L	G	I	A	E	I	G	V	V	G	K	D	V	L	L	D	S	G	R	D	L	F	E	P	V	D	L	G	F	G	A	C	R
Template Known Secondary structure				S	T	T											T	T												T	T	S								G	G	G							T	T	S	S	S														S											S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	A	K	K	D	T	Y	K	T	F	A	D	L	K	G	K	R	I	G	M	E	N	G	T	T	H	Q	K	Y	I	Q	D	Q	H	P	E	V	K	T	V	S	Y	D	S	Y	Q	N	A	F	I	D	L	K	N	G	R	I	D	G	V	F	G	D	T	A	V	V	N	E	W	L	K	T	N	P	Q	L	G	V
Query Conservation
Alig confidence										.	.	.																																								.	.																							.	.	.	.	.	.
Template Conservation										.	.	.																																								.	.																							.	.	.	.	.	.
Template Sequence		L	S	L	I	R	R	P	G	.	.	.	D	T	G	P	I	R	R	V	A	T	K	Y	P	N	F	T	A	R	L	L	K	E	R	G	W	A	A	D	V	V	E	L	S	G	N	I	E	L	A	.	.	A	V	T	G	L	A	D	A	V	V	D	V	V	Q	T	G	A	T	L	R	A	A	.	.	.	.	.	.
Template Known Secondary structure								T	T	.	.	.			S								S												T	T									S	S		T				.	.			T	T	S	S	S							S	S	S						T	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.																																								.	.																							.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	E	K	V	T	D	P	Q	Y	F	G	T	G	L	G	I	A	V	R	P	D	N	K	A	L	L	E	K	L	N	N	A	L	A	A	I	K	A
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	G	L	V	E	V	E	V	L	A	H	S	T	A	R	L	V	V	N	R	Q	A	L	K	L	K	R	A	V	L	K	P	L	I	Q	R	L	R	E
Template Known Secondary structure		.	T																								T
Template Predicted Secondary structure		.
Template SS confidence
			165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions