Return to main results Retrieve Phyre Job Id

Job DescriptionP30860
Confidence95.13%DateThu Jan 5 11:46:37 GMT 2012
Rank61Aligned Residues146
% Identity20%Templated1us5a_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  AAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQ. MQAECTFTNHA. FDSLIPSLKFRKYDAVISGMDITP. . . .
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Template Sequence  AQEFITIGSGS. . . . . . . . . TTGVYFPVATGIAKLVNDANVGIRANARSTGGSVANINAINAGEFEMALAQNDIAYYAYQ
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   17..20....... ..30.........40.........50.........60.........70.........80.......
 
   93......100.........110.........120.........130.........140..... ....150....
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Query Sequence  . . . . . . . . . . ERSKQVSFTTPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQH. . . . . . . . PEVKTVSYD
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Template Sequence  GCCIPAFEGKPVKTIRALAALYPEVVHVVARKDAGIRTVADLKGKRVVVGDVGSGTEQNARQILEAYGLTFDDLGQAIRV
Template Known Secondary structure  T
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   155....160.........170...
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Query Sequence  SYQNAFIDLKNGRIDGVFG
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Template Sequence  SASQGIQLMQDKRADALFY
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   168.170.........180......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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