Job Description P30860 Confidence 40.16% Date Thu Jan 5 11:46:37 GMT 2012 Rank 106 Aligned Residues 177 % Identity 11% Template d1o63a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.00

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60														.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	G	F	D	I	D	L	A	K	A	L	C	K	Q	M	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	E	C	T	F	T	N	H	A	F	D	S	L	I	P	S	L	K	F	R	K	Y	D	A	V	I	S	G	M	D	I	T	P	E	R	S	K	Q	V	S	F	T	T	P	Y	Y	E	N	S	A
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	G	R	L	E	E	K	V	X	T	Y	L	K	K	T	G	V	I	F	E	R	E	S	S	I	L	R	E	G	K	D	I	V	C	F	X	V	R	P	F	D	V	P	T	Y	L	V	H	G	V	A	D	I	G	F	C	G	T	D	V	L	L	E	K	E	T	S	L	I	Q	P	F	F	I	P	T	N	I	S
Template Known Secondary structure				S	T	T												T								S	S					T	T								G	G	G							T	T	S		S												S					B			S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	I	A	K	K	D	T	Y	K	T	F	A	D	L	K	G	K	R	I	G	M	E	N	G	T	T	H	Q	K	Y	I	Q	D	Q	H	P	E	V	K	T	V	S	Y	D	S	Y	Q	N	A	F	I	D	L	K	N	G	R	I	D	G	V	F	G	D	T	A	V	V	N	E	W	L	K	T	N	P	Q	L	G
Query Conservation
Alig confidence																		.																																						.	.																				.	.	.	.	.
Template Conservation																		.																																						.	.																				.	.	.	.	.
Template Sequence		R	X	V	L	A	G	P	K	G	R	G	I	P	E	G	E	.	K	R	I	A	T	K	F	P	N	V	T	Q	R	Y	C	E	S	K	G	W	H	C	R	I	I	P	L	K	G	S	V	E	L	A	P	I	A	.	.	G	L	S	D	L	I	V	D	I	T	E	T	G	R	T	L	K	E	N	.	.	.	.	.
Template Known Secondary structure									T	T	T				S	S		.						S													T									S	S		T	T						.	.	T	S		S							S	S	S						T	.	.	.	.	.
Template Predicted Secondary structure																		.																																						.	.																				.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	T	E	K	V	T	D	P	Q	Y	F	G	T	G	L	G	I	A	V	R	P	D	N	K	A	L	L	E	K	L	N	N	A	L	A	A	I	K	A
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	N	L	E	I	L	D	E	I	F	V	I	R	T	H	V	V	V	N	P	V	S	Y	R	T	K	R	E	E	V	V	S	F	L	E	K	L	Q	E
Template Known Secondary structure		.	.	T																								T
Template Predicted Secondary structure		.	.
Template SS confidence
				159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions