Job Description P30860 Confidence 62.42% Date Thu Jan 5 11:46:37 GMT 2012 Rank 89 Aligned Residues 157 % Identity 15% Template d1nh8a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.80

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		E	C	T	F	T	N	H	A	F	D	S	L	I	P	S	L	K	F	R	K	Y	D	A	V	I	S	G	M	D	I	T	P	E	R	S	K	Q	V	S	F	T	T	P	Y	.	.	Y	E	N	S	A	V	V	I	A	K	K	D	T	Y	K	T	F	A	D	L	K	G	K	R	I	G	M	E	N	G	T	T	H	Q
Query Conservation																																														.	.
Alig confidence																																														.	.
Template Conservation
Template Sequence		N	V	E	F	F	F	L	R	P	K	D	I	A	I	Y	V	G	S	G	E	L	D	F	G	I	T	G	R	D	L	V	C	D	S	G	A	Q	V	R	E	R	L	A	L	G	F	G	S	S	S	F	R	Y	A	A	P	A	G	R	N	W	T	T	A	D	L	A	G	M	R	I	A	T	A	Y	P	N	L	V	R
Template Known Secondary structure		T								G	G	G								S	S		S													T										S												T	T	S				G	G	G	G	T	T						S
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		K	Y	I	Q	D	Q	H	P	E	V	K	T	V	S	Y	D	S	Y	Q	N	A	F	I	D	L	K	N	G	R	I	D	G	V	F	G	D	T	A	V	V	N	E	W	L	K	T	N	P	Q	L	G	V	A	T	E	K	V	T	D	P	Q	Y	F	G	T	G	L	G	I	A	V	R	P	D	.	N	K	A	L	L
Query Conservation																																																																												.
Alig confidence																								.	.																							.	.	.	.	.	.	.																						.
Template Conservation																								.	.																							.	.	.	.	.	.	.
Template Sequence		K	D	L	A	T	K	G	I	E	A	T	V	I	R	L	D	G	A	V	E	I	S	.	.	V	Q	L	G	V	A	D	A	I	A	D	V	V	G	S	G	R	T	L	S	Q	H	.	.	.	.	.	.	.	D	L	V	A	F	G	E	P	L	C	D	S	E	A	V	L	I	E	R	A	E	A	R	D	Q	L	V
Template Known Secondary structure								T									S	S			T			.	.			T	T	S		S							S	S	S						T	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																								.	.																							.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		218	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	L	N	N	A	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	V	Q	G	V	V	F	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions