Return to main results Retrieve Phyre Job Id

Job DescriptionP30860
Confidence20.15%DateThu Jan 5 11:46:37 GMT 2012
Rank124Aligned Residues93
% Identity23%Templated1ieja_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Transferrin
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60....... ..70.........80.........90.........100...... ...110.....
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Query Sequence  DLAKALCKQMQAECTFTNH. AFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTTPYYE. . . . . . . . . . . . NSAVVIAKK
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Template Sequence  NNLRDLTQQERISLTCVQKATYLDCIKAIANNEADAITLDGGQVFEAGLAPYKLKPIAAEVYEHTEGSTTSYYAVAVVKK
Template Known Secondary structure  TTTSS
SSTTS

B
TSTTT


SSSST
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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   116...120.........130.........140.
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Query Sequence  DTYKTFADLKGKRIGMENGTTHQKYI
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Template Sequence  GTEFTVNDLQGKTSCHTGLGRSAGWN
Template Known Secondary structure  T



GGG
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   101........110.........120......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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