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Job Description | P30860 | Confidence | 20.15% | Date | Thu Jan 5 11:46:37 GMT 2012 |
Rank | 124 | Aligned Residues | 93 |
% Identity | 23% | Template | d1ieja_ |
SCOP info | Periplasmic binding protein-like II
| Periplasmic binding protein-like II
| Transferrin
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Resolution | 1.65 |
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49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | L | A | K | A | L | C | K | Q | M | Q | A | E | C | T | F | T | N | H | . |
A | F | D | S | L | I | P | S | L | K | F | R | K | Y | D | A | V | I | S | G | M | D | I | T | P | E | R | S | K | Q | V | S | F | T | T | P | Y | Y | E | . |
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N | S | A | V | V | I | A | K | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | N | L | R | D | L | T | Q | Q | E | R | I | S | L | T | C | V | Q | K | A | T | Y | L | D | C | I | K | A | I | A | N | N | E | A | D | A | I | T | L | D | G | G | Q | V | F | E | A | G | L | A | P | Y | K | L | K | P | I | A | A | E | V | Y | E | H | T | E | G | S | T | T | S | Y | Y | A | V | A | V | V | K | K |
Template Known Secondary structure |   |
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| S | S |  |  |  |  |  |  |  |  |  | T | T | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
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116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | T | Y | K | T | F | A | D | L | K | G | K | R | I | G | M | E | N | G | T | T | H | Q | K | Y | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | T | E | F | T | V | N | D | L | Q | G | K | T | S | C | H | T | G | L | G | R | S | A | G | W | N |
Template Known Secondary structure |   |
T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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