Return to main results Retrieve Phyre Job Id

Job DescriptionP77300
Confidence97.45%DateThu Jan 5 12:27:26 GMT 2012
Rank97Aligned Residues54
% Identity22%Templated2p4wa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PF1790-like
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60 ......
Predicted Secondary structure 

















.......


Query SS confidence 

















































. . . . . . .





Query Sequence  LQILDLFNEQATELKITDISKLMGLSKSTLHSLLKTLQLHGYIDQNPENG. . . . . . . KYRLGM
Query Conservation 
 


 

         


  


  


 


 

   
 
 
     ....... 
 

 
Alig confidence 








..






































.......





Template Conservation    

  
  ..      


  
  
   
  

  
   


         

    
 
  
Template Sequence  RRILFLLTK. . RPYFVSELSRELGVGQKAVLEHLRILEEAGLIESRVEKIPRGRPRKYYMIKK
Template Known Secondary structure  ..S
T

TTS

BTTB



T
Template Predicted Secondary structure 
..


















Template SS confidence 






























































   18.20...... ...30.........40.........50.........60.........70........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions