Return to main results Retrieve Phyre Job Id

Job DescriptionP77300
Confidence97.53%DateThu Jan 5 12:27:26 GMT 2012
Rank88Aligned Residues70
% Identity13%Templated2frha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20... ......30.........40.........50..... ....60.........70.........80
Predicted Secondary structure 




.







.....









Query SS confidence 












.































. . . . .
























Query Sequence  LQILDLFNEQATE. LKITDISKLMGLSKSTLHSLLKTLQLHGYIDQ. . . . . NPENGKYRLGMKLVERGHFVVGSID
Query Conservation 
 


 

     .    


  


  


 


 

   
 
 
.....      
 

     
         
Alig confidence 












.































.....
























Template Conservation    

  
        
  


  
      

  
  

  
 
 
     
 
   
 

  
      
     
Template Sequence  FAVLTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESLLSRVN
Template Known Secondary structure  T

SSSSTTSS

B

SSSS




S
Template Predicted Secondary structure 














Template SS confidence 











































































   137..140.........150.........160.........170.........180.........190.........200.........210..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions