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Job DescriptionP77300
Confidence100.00%DateThu Jan 5 12:27:26 GMT 2012
Rank6Aligned Residues237
% Identity27%Templatec3mq0A_
PDB info PDB header:transcription repressorChain: A: PDB Molecule:transcriptional repressor of the blcabc operon; PDBTitle: crystal structure of agobacterium tumefaciens repressor blcr
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  IQSVERALQILDLFNEQATELKITDISKLMGLSKSTLHSLLKTLQLHGYIDQNPENGKYRLGMKLVERGHFVVGSIDIRQ
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Template Sequence  VPALRRAVRILDLVAGSPRDLTAAELTRFLDLP. . SAHGLLAVMTELDLLARSAD. GTLRIGPHSLRWANGFLSHLDIVS
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T

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   26...30.........40.........50........ .60.........70........ .80.........90.........100..
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  KAKGWLTELSRRTGQTTHLGILDGREGVYIEKIEGKLAAIAYSRIGRRLPVHATAIGKVLIAWLGEAELNALLEGYQYTT
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Template Sequence  TFNDHLAQRHDLDPYTVTLTVREGGEVVYIGCRNHT. . . . . . FRIGMRLPAPFTATGKILLSDLGPGELRMLFSQF. PQP
Template Known Secondary structure  T
GGGTTSTT


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   105....110.........120.........130.........140 .........150.........160.........170.... ...
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  FTPATLASREALMSALAQTREQGYALDSEENEQGVRCVAVPVWNHESRVIAALSLSTLTSRVDDAELANFREQLQQAGLA
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Template Sequence  LTSRSVAGLSQLEEELALTRARGYSIDDGQIREGMLCIGAAIRDYSGAASAGIAISLIRSEASDEKIAYLGEELRTTANA
Template Known Secondary structure  SSTTS

STSSSSSTT
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   184.....190.........200.........210.........220.........230.........240.........250.........260...
 
   244.....250
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Query Sequence  LSRALGY
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Template Sequence  LSEKLGY
Template Known Secondary structure  TT
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   264.....270
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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