Job Description P77300 Confidence 88.02% Date Thu Jan 5 12:27:26 GMT 2012 Rank 349 Aligned Residues 73 % Identity 26% Template c3jyvT_ PDB info PDB header:ribosome Chain: T: PDB Molecule:s19e protein; PDBTitle: structure of the 40s rrna and proteins and p/e trna for eukaryotic2 ribosome based on cryo-em map of thermomyces lanuginosus ribosome at3 8.9a resolution Resolution 8.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.															.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	L	Q	I	L	D	L	F	N	E	Q	A	T	E	L	K	I	T	D	I	S	K	L	M	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	S	T	L	H	S	L	L	K	T	L	Q	L	H	G	Y	I	D	Q	N	P	E	N	G	K	Y	R	L	G	M	K	L	V	E	R	G	H	F
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.														.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.							.	.	.	.	.	.
Template Conservation															.																																																						.							.	.	.	.	.	.
Template Sequence		R	A	A	S	V	A	R	H	I	Y	M	R	K	.	Q	V	G	V	G	K	L	N	K	L	Y	G	G	A	K	S	R	G	V	R	P	Y	K	H	I	D	A	S	G	S	I	N	R	K	V	L	Q	A	L	E	K	I	G	I	V	E	I	S	P	K	G	G	R	.	R	I	S	E	N	G	.	.	.	.	.	.
Template Known Secondary structure													T		.		S		S	G	G	G	T	S	S	S	S			T	T	T				S	S	S																		T	T	T	S			B		T	T	S	S	B	.							.	.	.	.	.	.
Template Predicted Secondary structure															.																																																						.							.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	S	I	D	I	R	Q	K	A	K	G	W	L	T	E	L
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	Q	R	D	L	D	R	I	A	A	Q	T	L	E	E	D
Template Known Secondary structure		.	.	.
Template Predicted Secondary structure		.	.	.
Template SS confidence
					129	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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