Job Description P32173 Confidence 99.92% Date Thu Jan 5 11:49:52 GMT 2012 Rank 21 Aligned Residues 184 % Identity 13% Template d1w77a1 SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		L	M	T	T	I	T	G	V	V	L	A	G	G	K	A	R	R	M	G	G	V	D	K	G	L	L	E	L	N	G	K	P	L	W	Q	H	V	A	D	A	L	M	T	Q	L	S	H	V	V	V	N	A	N	R	H	Q	E	I	Y	Q	A	.	.	.	.	.	S	G	L	K	V	I	E	D	S	L	A	D	Y	P
Query Conservation																																																															.	.	.	.	.
Alig confidence															.	.	.	.	.	.																																											.	.	.	.	.
Template Conservation															.	.	.	.	.	.
Template Sequence		M	E	K	S	V	S	V	I	L	L	A	G	G	.	.	.	.	.	.	S	M	P	K	Q	Y	I	P	L	L	G	Q	P	I	A	L	Y	S	F	F	T	F	S	R	M	P	E	V	K	E	I	V	V	V	C	D	P	F	F	R	D	I	F	E	E	Y	E	E	S	I	D	V	D	L	R	F	A	I	P	G	K
Template Known Secondary structure			T	T											.	.	.	.	.	.				T	T	T	S			T	T													T		T	T										G	G	G	T					T	T	T	T	S		S	S									S
Template Predicted Secondary structure															.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																		.	.	.	.	.	.	.
Predicted Secondary structure																.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	P	L	A	G	M	L	S	V	M	Q	Q	E	A	.	.	G	E	W	F	L	F	C	P	C	D	T	P	Y	I	P	P	D	L	A	A	R	L	N	H	Q	R	K	D	A	P	V	V	W	V	H	D	G	E	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	T	I	A	L	V
Query Conservation																.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	Q	D	S	V	Y	S	G	L	Q	E	I	D	V	N	S	E	L	V	C	I	H	D	S	A	R	P	L	V	N	T	E	D	V	E	K	V	L	K	D	G	S	A	V	G	A	A	V	L	G	V	P	A	K	A	T	I	K	E	V	N	S	D	S	L	V	V	T	L	W	E	M	Q	T	P	Q	V	I	K
Template Known Secondary structure		S											T	S		T	T		S							T	T		T	T																	S										S					B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	A	I	E	P	L	L	L	E	Y	L	Q	A	G	E	R	R	V	M	V	F	M	R	L	A	G	G	H	A	V	D	F	S	D	H	K	D	A	F	V	N	V	N	T	P	E	E	L	A	R	W	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	L	L	K	K	G	F	E	L	V	K	S	E	G	L	E	V	T	D	V	S	I	V	E	Y	L	K	H	P	V	Y	V	S	Q	G	S	Y	T	N	I	K	V	T	T	P	D	D	L	L	L	A	E	R
Template Known Secondary structure															S									T	T	G	G	G	S	S									T	T						S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions