Return to main results Retrieve Phyre Job Id

Job DescriptionP32173
Confidence99.97%DateThu Jan 5 11:49:52 GMT 2012
Rank6Aligned Residues184
% Identity15%Templated1w55a1
SCOP infoNucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.. .......30.........40.........50.........60.........70.........80....
Predicted Secondary structure 










.























Query SS confidence 
















.





























































Query Sequence  TITGVVLAGGKARRMGG. VDKGLLELNGKPLWQHVADALMTQLSHVVVNANRHQEIYQASGLKVIEDSLADYPGPLAGML
Query Conservation   
 






 



  . 

 
  
 




   
  
        


                              
Alig confidence 
















.




















































.







Template Conservation   
 




 
 
 

    

 
  
 




   
  
        


     
               .     

 
Template Sequence  EMSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSSNITYMKKFTKNYEFIEGG. DTRAESLK
Template Known Secondary structure 


S

TTT
SSS
GGG
BTTTS

S
S
TT
SSS

.SS
Template Predicted Secondary structure 



































.

Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70... ......80.
 
   85....90.........100.........110.........120.........130.........140. ........150.
Predicted Secondary structure 
























.............
Query SS confidence 
























































. . . . . . . . . . . . .









Query Sequence  SVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQRKDAPVVWVHDGERDHPTIALVNRA. . . . . . . . . . . . . IEPLLLEYLQ
Query Conservation                  
 
      
  
                    
       .............    
     
Alig confidence 
























































.............









Template Conservation   

     
       
 


    
   
                                            
     
Template Sequence  KALELIDSEFVMVSDVARVLVSKNLFDRLIENLDKADCITPALKVADTTLFDNEALQREKIKLIQTPQISKTKLLKKALD
Template Known Secondary structure  TT

SSTT
TT

TTGGG
S


S
TT
GGG


S
TS
Template Predicted Secondary structure 


































Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   152.... ...160.........170.........180.........190.
Predicted Secondary structure 




..









Query SS confidence 




. .


































Query Sequence  AGERR. . VMVFMRLAGGHAVDFSDHKDAFVNVNTPEELARWQ
Query Conservation   
   ..                       







  
 
Alig confidence 




..


















.














Template Conservation        
        
  
  
    .   







  

Template Sequence  QNLEFTDDSTAIAAMGGKIWFVEGEE. NARKLTFKEDLKKLD
Template Known Secondary structure  S



SSTTT



G.GG



SGGGGGGS
Template Predicted Secondary structure 












.




Template SS confidence 









































   162.......170.........180....... ..190.........200..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions