Job Description P32173 Confidence 99.85% Date Thu Jan 5 11:49:52 GMT 2012 Rank 42 Aligned Residues 176 % Identity 13% Template d1vgwa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.35

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		M	T	T	I	T	G	V	V	L	A	G	G	K	A	R	R	M	G	G	V	D	K	G	L	L	E	L	N	G	K	P	L	W	Q	H	V	A	D	A	L	M	T	Q	L	S	H	V	V	V	N	A	N	R	H	Q	E	.	.	.	.	I	Y	Q	A	S	G	L	K	V	I	E	D	S	L	A	D	Y	P	G	P
Query Conservation																																																										.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.																																						.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.
Template Sequence		K	R	K	N	I	A	L	I	P	A	.	.	.	.	.	.	.	.	.	A	P	K	Q	Y	V	E	I	G	S	K	T	V	L	E	H	V	L	G	I	F	E	R	H	E	A	V	D	L	T	V	V	V	V	S	P	E	D	T	F	A	D	K	V	Q	T	A	F	P	Q	V	R	V	W	K	N	G	G	Q	T	R
Template Known Secondary structure												.	.	.	.	.	.	.	.	.				S					T	T													T		T	T										T	T		S	T									T	T	S								S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.										.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		80	.	.	.	.	.	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	G	M	L	S	V	M	Q	Q	E	.	.	.	.	.	.	.	A	G	E	W	F	L	F	C	P	C	D	T	P	Y	I	P	P	D	L	A	A	R	L	N	H	Q	R	K	D	A	P	V	V	W	V	H	D	G	E	R	D	H	P	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	T	V	R	N	G	V	A	K	L	L	E	T	G	L	A	A	E	T	D	N	I	L	V	H	D	A	A	R	C	C	L	P	S	E	A	L	A	R	L	I	E	Q	A	G	N	A	A	E	G	G	I	L	A	V	P	V	A	D	T	L	K	R	A	E	S	G	Q	I	S	A	T	V	D	R	S	G	L	W
Template Known Secondary structure																S	S	S		T	T	S							T	T		T	T														T	T		T	T										S						S	S	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
							136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	A	L	V	N	R	A	I	E	P	L	L	L	E	Y	L	Q	A	G	E	R	R	V	M	V	F	M	R	L	A	G	G	H	A	V	D	F	S	D	H	K	D	A	F	V	N	V	N	T	P	E	E	L	A	R	W	Q	E
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.														.	.	.																									.
Template Conservation																				.	.	.																									.
Template Sequence		Q	A	Q	T	P	Q	L	F	Q	A	G	L	L	H	R	A	L	A	.	.	.	A	G	I	T	D	E	A	S	A	V	E	K	L	G	V	R	P	L	L	I	Q	G	D	A	.	R	N	L	K	L	T	Q	P	Q	D	A	Y	I	V	R	L
Template Known Secondary structure																				.	.	.					S							T	T	T										T	.	T						S
Template Predicted Secondary structure																				.	.	.																									.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions