Job Description P32173 Confidence 99.85% Date Thu Jan 5 11:49:52 GMT 2012 Rank 41 Aligned Residues 182 % Identity 14% Template d1tzfa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.10

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	L	M	T	T	I	T	G	V	V	L	A	G	G	K	A	R	R	M	G	G	V	D	K	G	L	L	E	L	N	G	K	P	L	W	Q	H	V	A	D	A	L	M	T	Q	L	S	H	V	V	V	N	A	N	R	H	Q	E	I	Y	Q	A	S	G	L	K	V	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.												.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.												.	.	.	.
Template Sequence		M	A	S	K	.	.	.	.	A	V	I	L	A	G	G	L	G	V	K	.	.	.	.	P	K	P	M	V	E	I	G	G	K	P	I	L	W	H	I	M	K	M	Y	S	V	H	G	I	K	D	F	I	I	C	C	G	Y	K	G	Y	V	I	K	E	Y	F	A	N	Y	F	L	H	M	S	D	V	T	F	H	M
Template Known Secondary structure						.	.	.	.							S					.	.	.	.		G	G	G				T	T														T	T										T	T										T						S						G
Template Predicted Secondary structure						.	.	.	.												.	.	.	.
Template SS confidence
		1	.	.	.					.	.	.	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
																			69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	D	S	L	A	D	Y	P	G	P	L	A	G	M	L	S	V	M	Q	Q	E	A	G	E	W	F	L	F	C	P	C	D	T	P	Y	I	P	.	.	P	D	L	A	A	R	L	N	H	Q	R	K	D	A	P	V	V	W	V	H	D	G	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Template Conservation
Template Sequence		A	E	N	R	M	E	V	H	H	K	R	V	E	P	W	N	V	T	L	V	D	T	G	D	S	S	M	T	G	G	R	L	K	R	V	A	E	Y	V	K	D	D	E	A	F	L	F	T	Y	G	D	G	V	A	D	L	D	I	K	A	T	I	D	F	H	K	A	H	G	K	K	A	T	L	T	A	T	F	P	P
Template Known Secondary structure		G	G	T					T	T															S	S										T	G	G	G	T	T	T	S	S							T	T																				S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		130	.	.	.	.																										.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	D	H	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	L	V	N	R	A	I	E	P	L	L	L	E	Y	L	Q	A	G	E	R	R	V	M	V	F	M	R	L	A	G	G	H	A	V	D	F	S	D	H	K	D	A	F	V	N	V	N	T	P
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Conservation																																																															.	.
Template Sequence		G	R	F	G	A	L	D	I	Q	A	G	Q	V	R	S	F	Q	E	K	P	K	G	D	G	A	M	I	N	G	G	F	F	V	L	N	P	S	V	I	D	L	I	D	N	D	A	T	T	W	E	Q	E	P	L	M	T	L	A	Q	Q	G	.	.	E	L	M	A	F	E	H	P	G	F	W	Q	P	M	D	T	L
Template Known Secondary structure				S							T	T								S		S			S												G	G	G	G	G	G			S	T	T			T	T	T									T	T	.	.									S							S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	L	A	R	W	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	K	V	Y	L	E	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions