Job Description P32173 Confidence 99.91% Date Thu Jan 5 11:49:52 GMT 2012 Rank 33 Aligned Residues 187 % Identity 16% Template c3pnnA_ PDB info PDB header:transferase Chain: A: PDB Molecule:conserved domain protein; PDBTitle: the crystal structure of a glycosyltransferase from porphyromonas2 gingivalis w83 Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.
Predicted Secondary structure																				.																																					.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																																					.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	I	T	G	V	V	L	A	G	G	K	A	R	R	M	G	G	.	V	D	K	G	L	L	E	L	N	G	K	P	L	W	Q	H	V	A	D	A	L	M	T	Q	L	S	H	V	V	V	N	A	N	R	H	Q	.	.	E	I	Y	Q	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.																																					.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																																					.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	K	P	T	L	F	V	L	A	A	G	X	G	S	R	Y	G	S	L	K	Q	L	D	G	I	G	P	G	G	D	T	I	X	D	Y	S	V	Y	D	A	I	R	A	G	F	G	R	L	V	F	V	I	R	H	S	F	E	K	E	F	R	E	K	I	L	T	K	Y	E	G	R	I	P	V	E	L	V	F	Q	E
Template Known Secondary structure											T	T		B		T	T	S	S	B							S	T	T	S															T										G	G	G								T					T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
								66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.						.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																																			.	.	.	.	.																			.
Query SS confidence		.	.	.	.	.	.																																																			.	.	.	.	.																			.
Query Sequence		.	.	.	.	.	.	L	K	V	I	E	D	S	L	A	D	Y	P	G	P	L	A	G	M	L	S	V	M	Q	Q	E	A	G	E	W	F	L	F	C	P	C	D	T	P	Y	I	P	P	D	L	A	A	R	L	N	H	.	.	.	.	.	Q	R	K	D	A	P	V	V	W	V	H	D	G	E	R	D	H	P	.
Query Conservation		.	.	.	.	.	.																																																			.	.	.	.	.																			.
Alig confidence		.	.	.	.	.	.																											.										.														.	.	.	.	.																			.
Template Conservation																																		.										.
Template Sequence		L	D	R	L	P	E	G	F	S	C	P	E	G	R	E	K	P	W	G	T	N	H	A	V	L	X	G	R	D	A	I	R	.	E	P	F	A	V	I	N	A	D	.	D	F	Y	G	R	N	G	F	E	V	L	A	R	K	L	X	T	L	E	G	K	Q	G	E	Y	C	X	V	G	Y	R	V	G	N	T	L	S
Template Known Secondary structure		T	T				T	T					T	T			S										T	T	T	T	T			.	S							S	S	.		B															T	T	T	T		S	S									G	G	G	S		B
Template Predicted Secondary structure																																		.										.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
																																																								134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	A	L	V	N	R	A	I	E	P	L	L	L	E	Y	L	Q	A	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	G	G	V	S	R	G	V	C	Q	V	D	E	K	H	L	L	T	G	V	V	E	R	T	G	I	E	R	T	D	G	T	I	S	F	R	D	E	T	G	K	I	C	T	L	A	E	D	A	P	V	S	X	N	X	W	G	F	T	P	D	Y	F	D	Y	S	E	E	L	F	I	N	F	L	N	A	H	G	Q
Template Known Secondary structure		T	T	B											T	T	S	B														T	T							T	T	S							T	T												T																		T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
					153	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.	.	.													.	.	.
Query SS confidence		.	.	.													.	.	.
Query Sequence		.	.	.	G	E	R	R	V	M	V	F	M	R	L	A	.	.	.	G	G	H	A	V	D	F	S	D	H	K	D	A	F	V	N	V	N	T	P	E	E	L	A	R	W	Q	E	K
Query Conservation		.	.	.													.	.	.
Alig confidence		.	.	.													.	.	.
Template Conservation
Template Sequence		E	P	K	S	E	F	F	I	P	F	V	V	N	D	L	I	R	S	G	R	A	S	V	E	V	L	D	T	T	A	R	W	F	G	V	T	Y	S	D	D	R	P	G	V	V	A	K
Template Known Secondary structure			S	S																T	S									S				B			S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions