Job Description P32173 Confidence 99.92% Date Thu Jan 5 11:49:52 GMT 2012 Rank 23 Aligned Residues 182 % Identity 13% Template c3f1cB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative 2-c-methyl-d-erythritol 4-phosphate PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from listeria monocytogenes Resolution 2.30 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.											.	.	.	.	.	.
Query SS confidence																																											.											.	.	.	.	.	.
Query Sequence		I	T	G	V	V	L	A	G	G	K	A	R	R	M	G	G	V	D	K	G	L	L	E	L	N	G	K	P	L	W	Q	H	V	A	D	A	L	M	T	Q	L	.	S	H	V	V	V	N	A	N	R	H	.	.	.	.	.	.	Q	E	I	Y	Q	A	S	G	L	K	V	I	E	D	S	L	A	D	Y	P	G	P
Query Conservation																																											.											.	.	.	.	.	.
Alig confidence																.	.	.																									.											.	.	.	.	.	.
Template Conservation																.	.	.
Template Sequence		I	Y	A	Q	I	L	A	G	M	G	N	V	S	M	.	.	.	P	K	Q	F	L	P	L	N	G	K	P	I	I	V	H	T	V	E	K	F	I	L	N	T	R	F	D	K	I	L	I	S	S	P	K	E	W	M	N	H	A	E	D	N	I	K	K	Y	I	S	D	D	R	I	V	V	I	E	G	G	E	D	R
Template Known Secondary structure											T	T	T	S		.	.	.		G	G	G	S			T	T													T		T	T		S								G	G	G															T	T								S	S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	G	M	L	S	V	M	Q	.	.	.	.	.	.	.	Q	E	A	G	E	W	F	L	F	C	P	C	D	T	P	Y	I	P	P	D	L	A	A	R	L	N	H	Q	R	K	D	A	P	V	V	W	V	H	D	G	E	R	D	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	E	T	I	M	N	G	I	R	F	V	E	K	T	Y	G	L	T	D	D	D	I	I	V	T	H	D	A	V	R	P	F	L	T	H	R	I	I	E	E	N	I	D	A	A	L	E	T	G	A	V	D	T	V	I	E	A	L	D	T	I	V	E	S	S	N	H	E	V	I	T	D	I	P	V	R	D	H	M	Y
Template Known Secondary structure																T				T	T								T	T		T	T																T	S									S	S				B		S	S	S	S	S			B				G	G	G
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
						134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure		.	.	.	.																										.	.	.
Query SS confidence		.	.	.	.																										.	.	.
Query Sequence		.	.	.	.	T	I	A	L	V	N	R	A	I	E	P	L	L	L	E	Y	L	Q	A	G	E	R	R	V	M	.	.	.	V	F	M	R	L	A	G	G	H	A	V	D	F	S	D	H	K	D	A	F	V	N	V	N	T	P	E	E	L	A	R	W	Q	E
Query Conservation		.	.	.	.																										.	.	.
Alig confidence		.	.	.	.																										.	.	.															.
Template Conservation																																																.
Template Sequence		Q	G	Q	T	P	Q	S	F	N	M	K	K	V	F	N	H	Y	Q	N	L	T	P	E	K	K	Q	I	L	T	D	A	C	K	I	C	L	L	A	G	D	D	V	K	L	V	K	.	G	E	I	F	N	I	K	I	T	T	P	Y	D	L	K	V	A	N	A
Template Known Secondary structure																				T	S																			T								.			T	T						S
Template Predicted Secondary structure																																																.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions