 |
Job Description | P32173 | Confidence | 99.79% | Date | Thu Jan 5 11:49:52 GMT 2012 |
Rank | 51 | Aligned Residues | 124 |
% Identity | 20% | Template | c3d98A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:bifunctional protein glmu; |
PDBTitle: crystal structure of glmu from mycobacterium tuberculosis, ligand-free2 form
|
Resolution | 2.50 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | L | M | T | T | I | T | G | V | V | L | A | G | G | K | A | R | R | M | G | . |
G | V | D | K | G | L | L | E | L | N | G | K | P | L | W | Q | H | V | A | D | A | L | M | T | Q | L | S | H | V | V | V | N | A | N | R | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
Q | E | I | Y | Q | A | S | G | L | K | V | I | E | D |
Query Conservation |   |
  |   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|
|   | . |   |   |
|
|   |
|   |   |
|   |
|
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |
|
|   |
|   |   |
|
|   |
|
|
|
|   |
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
T | F | P | G | D | T | A | V | L | V | L | A | A | G | P | G | T | R | M | R | S | D | T | P | K | V | L | H | T | L | A | G | R | S | M | L | S | H | V | L | H | A | I | A | K | L | A | P | Q | R | L | I | V | V | L | G | H | D | H | Q | R | I | A | P | L | V | G | E | L | A | D | T | L | G | R | T | I | D | V | A |
Template Known Secondary structure |   |
|
|
| S | S |
|  |  |  |  |  |
|
| S |
|
| G | G | G |
| S | S | S |
| G | G | G |
|  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | A | D | Y | P | G | P | L | A | G | M | L | S | V | M | Q | Q | E | A | G | E | W | . |
. |
. |
F | L | F | C | P | C | D | T | P | Y | I | P | P | D | L | A | A | R | L | N | H | Q | R | K | D | A | P | V | V | W | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
L | Q | D | R | P | L | G | T | G | H | A | V | L | C | G | L | S | A | L | P | D | D | Y | A | G | N | V | V | V | T | S | G | D | T | P | L | L | D | A | D | T | L | A | D | L | I | A | T | H | R | A | V | S | A | A | V | T |
Template Known Secondary structure |   |
 |
| S | S |
|
|
|  |  |  |  |  |  |  |  |  | T | T | S |
| T | T |
|
| S |
|  |  |  |  |  | S | S |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|