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Job Description | P32173 | Confidence | 63.69% | Date | Thu Jan 5 11:49:52 GMT 2012 |
Rank | 81 | Aligned Residues | 102 |
% Identity | 9% | Template | c2z86D_ |
PDB info |
PDB header:transferase | Chain: D: PDB Molecule:chondroitin synthase; |
PDBTitle: crystal structure of chondroitin polymerase from2 escherichia coli strain k4 (k4cp) complexed with udp-glcua3 and udp
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Resolution | 2.40 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
L | L | E | L | N | G | K | P | . |
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E | I | Y | Q | A | S | G | L | K | V | I | E | D | S | L | A | D | Y | P | G | P | L | A | G | M | L | S | V | M | Q | Q | E | A | G | E | W |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | I | P | T | Y | N | R | A | K | I | L | A | I | T | L | A | C | L | C | N | Q | K | T | I | Y | D | Y | E | V | I | V | A | D | D | G | S | K | E | N | I | E | E | I | V | R | E | F | E | S | L | L | N | I | K | Y | V | R | Q | K | D | Y | G | Y | Q | L | C | A | V | R | N | L | G | L | R | A | A | K | Y | N | Y |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
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95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
F | L | F | C | P | C | D | T | P | Y | I | P | P | D | L | A | A | R | L | N | H | Q | R | K | D | A | P | V | V | W | V | H | D | G | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | A | I | L | D | C | D | M | . |
A | P | N | P | L | W | V | Q | S | Y | M | E | L | L | A | V | D | D | N | V | A | L | I | G | P | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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235 | . | . | . | . | 240 | . | . | |
. | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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