Job Description P32173 Confidence 99.89% Date Thu Jan 5 11:49:52 GMT 2012 Rank 38 Aligned Residues 178 % Identity 16% Template c2e3dB_ PDB info PDB header:transferase Chain: B: PDB Molecule:utp--glucose-1-phosphate uridylyltransferase; PDBTitle: crystal structure of e. coli glucose-1-phosphate2 uridylyltransferase Resolution 1.95 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	V	V	L	A	G	G	K	A	R	R	M	G	.	.	.	.	G	V	D	K	G	L	L	E	L	N	G	K	P	L	W	Q	H	V	A	D	A	L	M	T	Q	L	S	H	V	V	V	N	A	N	R	H	Q	E	I	Y	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	D	K	P	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	E	I	V	L	V	T	H	S	S	K	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L	E	K	R	Q	L	L	D
Template Known Secondary structure									S			G	G	G	T	T	T	T	S	S	S		G	G	G				T	T														T	T										G	G	G								S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
							64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.											.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	S	G	L	K	V	I	E	D	S	L	A	D	Y	P	G	P	L	A	G	M	L	S	V	M	Q	Q	E	A	G	E	W	F	L	F	C	P	C	D	T	P	Y	I	P	.	.	.	.	.	.	.	.	.	.	P	D	L	A	A	R	L	N	H	Q	R	K	D	A	P	V	V	W	V	H	D	G
Query Conservation		.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	K	G	L	G	H	A	V	L	C	A	H	P	V	V	G	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F	D	E	T	G	H	S	Q	I	M	V	E	P	V	A	D
Template Known Secondary structure						S	S		T	T																									S	S							T	T					T	T	T	S		T	T	T	S	T																						S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		129	130	.	.	.	.	.																																					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		E	R	D	H	P	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	V	N	R	A	I	E	P	L	L	L	E	Y	L	Q	A	G	E	R	R	V	M	V	F	M	R	L	A	G	G	.	H	A	V	D	F
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.													.
Template Conservation																																																										.	.	.	.	.	.
Template Sequence		V	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	A	P	S	N	L	A	I	V	G	R	Y	V	L	S	A	D	I	W	P	L	L	A	K	.	.	.	.	.	.	T	Q	L	T	D	A	I	D	M	L	I	E	K	E	T	V	E	A
Template Known Secondary structure		G	G	G	S						T	T					T	T											S			G	G	G		S		S											T	T								.	.	.	.	.	.														S
Template Predicted Secondary structure																																																										.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	H	K	D	A	F	V	N	V	N	T	P	E	E	L	A	R	W	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	H	M	K	G	K	S	H	D	C	G	N	K	L	G	Y	M	Q	A	F
Template Known Secondary structure						S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions