Return to main results Retrieve Phyre Job Id

Job DescriptionP76083
Confidence98.28%DateThu Jan 5 12:18:27 GMT 2012
Rank168Aligned Residues121
% Identity15%Templated5mdha1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10... ......20......... 30.........40.........50.........60.........70........
Predicted Secondary structure 

.



.......













Query SS confidence 






.















. . . . . . .
















































Query Sequence  TVAVIGS. GTMGAGIAEVAASHGH. . . . . . . QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTD
Query Conservation   
 



.
 

  

   
  
 ....... 
 
 
     
      
   
      
             
     
Alig confidence 






.















.......









.....




















.......





Template Conservation 

 



 
 

   
  
            

 
 

   .....     
  


          .......
 
   
Template Sequence  RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM. . . . . MGVLDGVLMELQDCALPLLKD. . . . . . . VIATDK
Template Known Secondary structure  SSTTSTTTTTTT
TT



GGG.....T

TT.......S
Template Predicted Secondary structure 














.....




.......

Template SS confidence 















































































   5....10.........20.........30.........40..... ....50.........60...... ...70..
 
   79 80.........90... ......100.........110.........120.........130.... ...
Predicted Secondary structure  .





..............















......
Query SS confidence 
.













. . . . . . . . . . . . . .








































. . . . . .


Query Sequence  I. HALAAADLVIEAAS. . . . . . . . . . . . . . ERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEIKN. . . . . . PER
Query Conservation   .  
  







 ..............
 
  
  
   
        








 
  

     ......
 
Alig confidence 
.













..............


























..











......


Template Conservation         








   
 
 

 


  
  
       
   
 
 
 




..



  
 
    
  

   
Template Sequence  EEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG. . NPANTNCLTASKSAPSIPKEN
Template Known Secondary structure  TTT
S

S



TT

TTTTS
TT

S..SST
TTS
GGG
Template Predicted Secondary structure 


















..






Template SS confidence 















































































   73......80.........90.........100.........110.........120......... 130.........140.........150
 
   138.140.
Predicted Secondary structure 
Query SS confidence 



Query Sequence  VAGL
Query Conservation    
 
Alig confidence 



Template Conservation 
   
Template Sequence  FSCL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   151...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions