Job Description P76083 Confidence 98.89% Date Thu Jan 5 12:18:27 GMT 2012 Rank 130 Aligned Residues 122 % Identity 21% Template c8ldhA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:m4 apo-lactate dehydrogenase; PDBTitle: refined crystal structure of dogfish m4 apo-lactate2 dehydrogenase Resolution 2.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	.	.	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D	I	H	A	L	A	A
Query Conservation																									.	.
Alig confidence																									.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	V	V	G	V	G	A	V	G	M	A	C	A	I	S	I	L	M	K	D	L	A	D	E	V	A	L	V	D	V	M	E	D	K	L	K	G	E	M	M	D	L	Q	H	G	S	L	F	L	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	I	V	S	G	K	D	Y	S	V	S	A	G
Template Known Secondary structure									S												T	T	T			S							S															T	G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	G	G	G	G	T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.														.	.	.	.	.	80	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.															.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Query Sequence		A	D	L	V	I	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	A	E	I	K	.	.	N	P	E	R	V	A	G	L
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Template Conservation
Template Sequence		S	K	L	V	V	I	T	A	G	A	R	Q	Q	E	G	E	S	R	L	N	L	V	Q	R	N	V	N	I	F	K	F	I	I	P	N	I	V	K	H	S	P	D	C	I	I	L	V	V	S	N	P	V	D	V	L	T	Y	V	A	W	K	L	S	G	L	P	M	H	R	I	I	G	S
Template Known Secondary structure			S												T	T																										T	T							S	S	S													T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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