Job Description P76083 Confidence 98.07% Date Thu Jan 5 12:18:27 GMT 2012 Rank 189 Aligned Residues 125 % Identity 14% Template c7mdhA_ PDB info PDB header:chloroplastic malate dehydrogenase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: structural basis for light acitvation of a chloroplast enzyme. the2 structure of sorghum nadp-malate dehydrogenase in its oxidized form Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.								30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure												.																	.	.	.	.	.	.	.
Query SS confidence												.																	.	.	.	.	.	.	.
Query Sequence		N	V	Q	T	V	A	V	I	G	S	.	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	.	.	.	.	.	.	.	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P
Query Conservation												.																	.	.	.	.	.	.	.
Alig confidence												.																	.	.	.	.	.	.	.												.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.																				.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	V	N	I	A	V	S	G	A	A	G	M	I	S	N	H	L	L	F	K	L	A	S	G	E	V	F	G	Q	D	Q	P	I	A	L	K	L	L	G	S	E	R	S	F	.	Q	A	L	E	G	V	A	M	E	L	E	D	S	L	Y	P	L	L	R	.	.	.	.	.	.	.	.	.	.	E	V	S	I	G
Template Known Secondary structure										T	T	T	S													T	T	T	T		T	T											G	G	G		.												T	T	T		T	T			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.											.	110	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.															90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Query Sequence		V	T	D	I	H	A	L	A	A	A	D	L	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	A	S	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	A	.	.	.	.	.	.	E	I	K	N	P
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.								.	.	.	.	.	.
Template Conservation																																																														.	.
Template Sequence		I	D	P	Y	E	V	F	E	D	V	D	W	A	L	L	I	G	A	K	P	R	G	P	G	M	E	R	A	A	L	L	D	I	N	G	Q	I	F	A	D	Q	G	K	A	L	N	A	V	A	S	K	N	V	K	V	L	V	V	G	N	.	.	P	C	N	T	N	A	L	I	C	L	K	N	A	P	D	I	P	A
Template Known Secondary structure		S						T	T	T		S												T	T																									S		T	T							S	S	.	.	S											T		T	T	S		G
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		136	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	V	A	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	F	H	A	L
Template Known Secondary structure		G	G
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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