Job Description P76083 Confidence 98.19% Date Thu Jan 5 12:18:27 GMT 2012 Rank 177 Aligned Residues 119 % Identity 18% Template c5mdhB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of ternary complex of porcine cytoplasmic malate2 dehydrogenase alpha-ketomalonate and tnad at 2.4 angstroms resolution Resolution 2.40 Å

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		7	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.								30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																	.	.	.	.	.	.	.
Query SS confidence									.																	.	.	.	.	.	.	.
Query Sequence		T	V	A	V	I	G	S	.	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	.	.	.	.	.	.	.	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D
Query Conservation									.																	.	.	.	.	.	.	.
Alig confidence									.																	.	.	.	.	.	.	.												.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	L	V	T	G	A	A	G	Q	I	A	Y	S	L	L	Y	S	I	G	N	G	S	V	F	G	K	D	Q	P	I	I	L	V	L	L	D	I	T	P	M	M	.	G	V	L	D	G	V	L	M	E	L	Q	D	C	A	L	P	L	L	K	.	.	.	.	.	.	.	.	.	.	.	D	V	I	A	T	D	K
Template Known Secondary structure							S	T	T	S	T											T	T	T	T	T		T	T											G	G	G		.													T			T	T			.	.	.	.	.	.	.	.	.	.	.						S
Template Predicted Secondary structure																																												.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.												.	.	.	.	70	.	.
		79		80	.	.	.	.	.	.	.	.	.	90	.															.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.
Predicted Secondary structure			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																.	.	.	.	.	.
Query SS confidence			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																.	.	.	.	.	.
Query Sequence		I	.	H	A	L	A	A	A	D	L	V	I	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	.	.	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	.	.	.	.	.	.	A	E	I	K	N	P
Query Conservation			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																.	.	.	.	.	.
Alig confidence			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.						.	.	.	.							.	.	.	.	.	.
Template Conservation																																																												.	.	.	.
Template Sequence		E	E	I	A	F	K	D	L	D	V	A	I	L	V	G	S	M	P	R	R	D	G	M	E	R	K	D	L	L	K	A	N	V	K	I	F	K	C	Q	G	A	A	L	D	K	Y	A	K	K	S	V	K	V	I	V	V	G	N	.	.	.	.	P	A	N	T	N	C	L	T	A	S	K	S	A	P	S	I	P	K
Template Known Secondary structure						T	T	T		S							S					S	S	S		S		T	T																			S		T	T							S	S	.	.	.	.	S											T		T	T	S		G
Template Predicted Secondary structure																																																												.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		136	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	V	A	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	F	S	C	L
Template Known Secondary structure		G	G
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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