Job Description P76083 Confidence 99.60% Date Thu Jan 5 12:18:27 GMT 2012 Rank 59 Aligned Residues 205 % Identity 18% Template c3prjB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: role of packing defects in the evolution of allostery and induced fit2 in human udp-glucose dehydrogenase. Resolution 3.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																													.	.																			.	.	.	.	.	.	.	.
Query SS confidence																													.	.																			.	.	.	.	.	.	.	.
Query Sequence		M	I	N	V	Q	T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	.	.	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	.	.	.	.	.	.	.	.	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K
Query Conservation																													.	.																			.	.	.	.	.	.	.	.
Alig confidence																													.	.																			.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	F	E	I	K	K	I	C	C	I	G	A	G	Y	V	G	G	P	T	C	S	V	I	A	H	M	C	P	E	I	R	V	T	V	V	D	V	N	E	S	R	I	N	A	W	N	S	P	T	L	P	I	Y	E	P	G	L	K	E	V	V	E	S	C	R	G	K	N	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														S	T	T													T	T	S							S										S	S	S		S	S			T	T									B	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.														.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.								.	.	.	130
Predicted Secondary structure										.																.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Query SS confidence										.																.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Query Sequence		R	L	I	P	V	T	D	I	.	H	A	L	A	A	A	D	L	V	I	E	A	A	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	.	.	.	.	.	.	.	A	I	A	A
Query Conservation										.																.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Alig confidence		.								.																.	.	.	.	.	.	.	.	.	.	.	.	.																							.										.	.	.	.	.	.	.
Template Conservation		.																																																											.
Template Sequence		.	L	F	F	S	T	N	I	D	D	A	I	K	E	A	D	L	V	F	I	S	V	N	T	P	T	K	T	Y	G	M	G	K	G	R	A	A	D	L	K	Y	I	E	A	C	A	R	R	I	V	Q	N	S	N	G	Y	K	I	V	.	T	E	K	S	T	V	P	V	R	A	A	E	S	I	R	R	I	F	D	A
Template Known Secondary structure		.					S								T		S										B		S	S	S	T	T	T	T	T	S	B		T													T			S					.					S	S			S
Template Predicted Secondary structure		.																																																											.
Template SS confidence
			69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.									.	.	.															.								.	.	.	.	.										.	.
Query SS confidence																										.	.	.	.	.	.	.									.	.	.															.								.	.	.	.	.										.	.
Query Sequence		E	I	K	N	P	E	R	V	A	G	L	H	F	F	N	P	A	P	V	M	K	L	V	E	.	.	.	.	.	.	.	V	V	S	G	L	A	T	A	.	.	.	A	E	V	V	E	Q	L	C	E	L	T	L	S	W	.	G	K	Q	P	V	R	C	.	.	.	.	.	H	S	T	P	G	F	I	V	N	.	.
Query Conservation																										.	.	.	.	.	.	.									.	.	.															.								.	.	.	.	.										.	.
Alig confidence																										.	.	.	.	.	.	.									.	.	.															.								.	.	.	.	.										.	.
Template Conservation
Template Sequence		N	T	K	P	N	L	N	L	Q	V	L	S	N	P	E	F	L	A	E	G	T	A	I	K	D	L	K	N	P	D	R	V	L	I	G	G	D	E	T	P	E	G	Q	R	A	V	Q	A	L	C	A	V	Y	E	H	W	V	P	R	E	K	I	L	T	T	N	T	W	S	S	E	L	S	K	L	A	A	N	A	F
Template Known Secondary structure		S			S	S														T	T	S							S		S								S	S																T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
			193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	R	V	A	R	P	Y	Y	S	E	A	W	R	A	L	E	E	Q	V	A	A	P	E	V	I	D	A	A	L
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		L	A	Q	R	I	S	S	I	N	S	I	S	A	L	C	E	A	T	G	A	D	V	E	E	V	A	T	A	I
Template Known Secondary structure																				T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions