|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | N | V | Q | T | V | A | V | I | G | S | G | T | M | G | A | G | I | A | E | V | A | A | S | H | G | H | Q | V | L | L | Y | D | I | S | A | E | A | L | T | R | A | I | D | . |
. |
. |
. |
G | I | H | A | R | L | N | S | R | V | T | R | G | K | L | T | A | E | T | C | E | R | T | L | K | R | L | I | P | V | T | D |
Query Conservation |   |
  |   |
|   |   |
|   |
|
|
|
|
|   |
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   | . | . | . | . |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |
|
|
|
|
|   |
|
|   |   |   |
|   |   |
|
|   | . |
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
Template Sequence |   |
S | E | F | M | K | I | T | I | S | G | T | G | Y | V | G | L | S | N | G | V | L | I | A | Q | . |
N | H | E | V | V | A | L | D | I | V | Q | A | K | V | D | M | L | N | Q | K | I | S | P | I | V | D | K | E | I | Q | E | Y | L | A | E | K | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | N | F | R | A | T | T | D |
Template Known Secondary structure |   |
T | T | S |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  | T | . | T | S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  | T | T |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  | S |
| . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  | S |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
997 | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | |
. | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 1060 | . | . | . | . | . |
  |
  |   |
79 | |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 | . |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | . |
H | A | L | A | A | A | D | L | V | I | E | A | A | S | E | R | L | E | V | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
K | A | L | F | A | Q | L | A | E | V | C | P | P | Q | T | L | L | T | T | N | T | S | S | I | S | I | T | A | I | A | A | E | I | K | N | P | E | R | V | A | G | L | H | F | F | N | P | A | P |
Query Conservation |   |
  | . |   |   |
|   |   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |
| . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |   |   |   |   |
|   |
|   |   |
|   |
|
|
|   |
|   |   |
Alig confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |
|
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |
|
|   |
Template Sequence |   |
K | H | D | A | Y | R | N | A | D | Y | V | I | I | A | T | P | T | D | Y | D | P | K | T | N | Y | F | N | T | S | T | V | E | A | V | I | R | D | V | T | E | I | N | P | N | A | V | M | I | I | K | S | T | I | P | V | G | F | T | R | D | I | K | E | R | L | G | I | D | N | V | I | . |
. |
. |
. |
F | S | P | E | F |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
|
|  |  |  | T | T | T | T |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |
| S |
|
|
| T | T |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  | . | . | . | . |  |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
|
|
|
. | . | 140 | . | . |
  |
  |   |
149 | 150 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
|
180 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 190 | . | . | . | . | . | . | |
|
|
. | . | . | 200 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | M | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | V | E | V | V | S | G | L | A | T | A | A | E | V | V | E | Q | L | C | E | L | T | L | S | W | G | K | Q | . |
. |
P | V | R | C | H | S | T | P | G | . |
. |
. |
. |
. |
F | I | V | N | R | V | A | R | . |
. |
. |
P | Y | Y | S | E | A | W | R | A | L | E | E | Q |
Query Conservation |   |
  |   |   | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   | . | . |
|
|   |
|   |
|   |
|
| . | . | . | . | . |
|
|   |
|
|
|   |   | . | . | . |   |   |   |   |
|
|   |   |
|   |   |
|
|
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |   | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|   |   |   |
|
|
|   |   |
Template Sequence |   |
L | R | E | G | R | A | L | Y | D | N | L | H | P | S | R | I | V | I | G | E | R | . |
S | A | R | A | E | R | F | A | D | L | L | K | E | G | A | I | K | Q | D | I | P | T | L | F | T | D | S | T | E | A | E | A | I | K | L | F | A | N | T | Y | L | A | L | R | V | A | Y | F | N | E | L | D | S | Y | A | E | S | Q |
Template Known Secondary structure |   |
|
| T | T | S |  |  |  |  |  |  | S |
| S |
|  |  |  | S | S |
| . | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S | S |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . |
  |
  |   |
210 | . | . | . | . | . | . | . | . | . | 220 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | A | P | E | V | I | D | A | A | L | R |
Query Conservation |   |
  |
|   |   |   |   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |
|   |   |
|   |   |
Template Sequence |   |
G | L | N | S | K | Q | I | I | E | G | V | C |
Template Known Secondary structure |   |
T |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
222 | . | . | . | . | . | . | . | 230 | . | . | . |
  |