Job Description P76083 Confidence 99.64% Date Thu Jan 5 12:18:27 GMT 2012 Rank 48 Aligned Residues 197 % Identity 16% Template c3ojlA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:cap5o; PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus Resolution 2.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.
Query Sequence		T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	.	.	.	.	.	.	.	.	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D
Query Conservation																																										.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	T	V	V	G	L	G	Y	I	G	L	P	T	S	I	M	F	A	K	H	G	V	D	V	L	G	V	D	I	N	Q	Q	T	I	D	K	L	Q	N	G	Q	I	S	I	E	E	P	G	L	Q	E	V	Y	E	E	V	L	S	S	G	K	L	K	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	T	T											T	T								S										T	T			S	S			T	T											T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.											.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																																		.	.	.																	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.																																		.	.	.																	.	.
Query Sequence		I	H	A	L	A	A	A	D	L	V	I	E	A	A	S	E	.	.	.	.	.	.	.	.	.	.	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	A	.	.	.	I	A	A	E	I	K	N	P	E	R	V	A	G	L	H	F	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.																																		.	.	.																	.	.
Alig confidence		.																.	.	.	.	.	.	.	.	.	.																																		.	.	.																	.	.
Template Conservation		.
Template Sequence		.	T	T	P	E	A	S	D	V	F	I	I	A	V	P	T	P	N	N	D	D	Q	Y	R	S	C	D	I	S	L	V	M	R	A	L	D	S	I	L	P	F	L	K	K	G	N	T	I	I	V	E	S	T	I	A	P	K	T	M	D	D	F	V	K	P	V	I	E	N	L	G	F	T	I	G	E	D	I	Y	L
Template Known Secondary structure		.	S	S					S										B		S	S	T	T			B													G	G	G			T	T							S				T	T					T							T	T	T			B	T	T	T	B
Template Predicted Secondary structure		.
Template SS confidence
			68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
			144	.	.	.	.	.	150	.	.	.	.										.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.												.	.	.	.	.	.	.	.	.																														.	.	.	.	.										.	.	.
Query SS confidence		.												.	.	.	.	.	.	.	.	.																														.	.	.	.	.										.	.	.
Query Sequence		.	F	N	P	A	P	V	M	K	L	V	E	.	.	.	.	.	.	.	.	.	V	V	S	G	L	A	T	A	A	E	V	V	E	Q	L	C	E	L	T	L	S	W	G	K	Q	P	V	R	C	.	.	.	.	.	H	S	T	P	G	F	I	V	N	.	.	.	R	V	A	R	P	Y	Y	S	E	A	W	R	A
Query Conservation		.												.	.	.	.	.	.	.	.	.																														.	.	.	.	.										.	.	.
Alig confidence		.												.	.	.	.	.	.	.	.	.					.	.																								.	.	.	.	.										.	.	.
Template Conservation																											.	.
Template Sequence		V	H	C	P	E	R	V	L	P	G	K	I	L	E	E	L	V	H	N	N	R	I	I	G	G	.	.	V	T	K	A	C	I	E	A	G	K	R	V	Y	R	T	F	V	Q	G	E	M	I	E	T	D	A	R	T	A	E	M	S	K	L	M	E	N	T	Y	R	D	V	N	I	A	L	A	N	E	L	T	K	I
Template Known Secondary structure										S	S									S							.	.	S	S												T	T	T			S
Template Predicted Secondary structure																											.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	E	Q	V	A	A	P	E	V	I	D	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	N	N	L	N	I	N	V	L	D	V	I	E	M	A
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions