Job Description P76083 Confidence 99.58% Date Thu Jan 5 12:18:27 GMT 2012 Rank 63 Aligned Residues 156 % Identity 19% Template c3ktdC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of a putative prephenate dehydrogenase (cgl0226)2 from corynebacterium glutamicum atcc 13032 at 2.60 a resolution Resolution 2.60 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D	I	H	A	L	A	A	A
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Sequence		R	P	V	C	I	L	G	L	G	L	I	G	G	S	L	L	R	D	L	H	A	A	N	H	S	V	F	G	Y	N	R	S	R	S	G	A	K	S	A	V	D	.	.	.	.	.	.	.	.	.	.	.	E	G	F	D	V	S	A	D	L	E	A	T	L	Q	.	.	.	.	.	.	.	.	R	A	A	A	E	D
Template Known Secondary structure		S								S													T	T								S	S										.	.	.	.	.	.	.	.	.	.	.	T	T					S								.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.												.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.												.	150	.	.	.
Predicted Secondary structure																																							.																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	V	I	E	A	A	S	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	.	I	S	I	T	A	I	A	A	E	I	K	N	P	E	R	V	A	G	L	H	F	F	N	P	A	P	.	.	.	.	.	.	.	.	.	.	.	V	M	K	L	V
Query Conservation																																							.																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.															.													.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.															.
Template Sequence		A	L	I	V	L	A	V	P	.	.	X	T	A	I	D	S	L	L	D	A	V	H	T	H	.	A	P	N	N	G	F	T	D	V	V	S	V	K	T	A	V	Y	D	A	V	K	A	R	N	X	Q	H	R	Y	V	G	S	H	P	X	A	G	T	A	N	G	W	S	A	S	X	D	G	L	F	K	R	A	V	W
Template Known Secondary structure								S		.	.															.		T	T								S		S										T	T		G	G	G	B						T	T						G	G	G			S	S	S	S	T	T
Template Predicted Secondary structure										.	.															.
Template SS confidence
		69	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.									.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.
Query Sequence		E	V	V	S	G	L	A	T	A	A	.	.	.	.	.	.	.	.	E	V	V	E	Q	L	C	E	L	T	L	S	W	G	K	Q	P	V	R	C
Query Conservation												.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	T	F	D	Q	L	F	D	G	T	D	I	N	S	T	W	I	S	I	W	K	D	V	V	Q	X	A	L	A	V	G	A	E	V	V	P	S
Template Known Secondary structure						G	G	G	T	S	S																					T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions