Job Description P76083 Confidence 100.00% Date Thu Jan 5 12:18:27 GMT 2012 Rank 5 Aligned Residues 380 % Identity 28% Template c3k6jA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein f01g10.3, confirmed by transcript evidence; PDBTitle: crystal structure of the dehydrogenase part of multifuctional enzyme 12 from c.elegans Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	V	Q	T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D	I	H	A	L
Query Conservation
Alig confidence																																																.	.	.
Template Conservation																																																.	.	.
Template Sequence		Y	D	V	N	S	V	A	I	I	G	G	G	T	M	G	K	A	M	A	I	C	F	G	L	A	G	I	E	T	F	L	V	V	R	N	E	Q	R	C	K	Q	E	L	E	V	M	.	.	.	Y	A	R	E	K	S	F	K	R	L	N	D	K	R	I	E	K	I	N	A	N	L	K	I	T	S	D	F	H	K	L
Template Known Secondary structure													S													T	T								S													.	.	.							T	T	S											T	T					S		G	G	G
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	D	L	V	I	E	A	A	S	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	A	E	I	K	N	P	E	R	V	A	G	L	H	F	F	N	P	A	P	V	M	K	L	V	E	V	V	S	G	L	A	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	C	D	L	I	V	E	S	V	I	E	D	M	K	L	K	K	E	L	F	A	N	L	E	N	I	C	K	S	T	C	I	F	G	T	N	T	S	S	L	D	L	N	E	I	S	S	V	L	R	D	P	S	N	L	V	G	I	H	F	F	N	P	A	N	V	I	R	L	V	E	I	I	Y	G	S	H	T	S
Template Known Secondary structure		T	T		S								S														T	T	S		T	T								S	S	S							T	T	S	S	S	G	G	G								S	S	T	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	V	V	E	Q	L	C	E	L	T	L	S	W	G	K	Q	P	V	R	C	H	S	T	P	G	F	I	V	N	R	V	A	R	P	Y	Y	S	E	A	W	R	A	L	E	E	Q	V	A	A	P	E	V	I	D	A	A	L	R	D	G	A	G	F	P	M	G	P	L	E	L	T	D	L	I	G	Q	D	V	N
Query Conservation
Alig confidence																																																														.
Template Conservation																																																														.
Template Sequence		S	Q	A	I	A	T	A	F	Q	A	C	E	S	I	K	K	L	P	V	L	V	G	N	C	K	S	F	V	F	N	R	L	L	H	V	Y	F	D	Q	S	Q	K	L	M	Y	E	Y	G	Y	L	P	H	Q	I	D	K	I	I	T	N	.	F	G	F	L	M	G	P	M	T	V	A	D	M	N	G	F	D	V	M
Template Known Secondary structure															T	T							S	S																							T	S														.		T	B	S	S											T
Template Predicted Secondary structure																																																														.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	V	T	C	S	V	F	N	A	F	W	Q	E	R	R	F	L	P	S	L	V	Q	Q	E	L	V	I	G	G	R	L	G	K	K	S	G	L	G	V	Y	D	W	R	A	E	R	E	A	V	V	G	L	E	A	V	S	D	S	F	S	P	M	K	V	E	K	K	S	D	G	V	T	E	I	D	D	V	L	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	L	K	K	E	N	.	.	.	.	.	.	.	.	G	L	E	P	N	P	I	E	K	E	M	W	R	L	K	R	Y	G	R	K	T	N	K	G	F	Y	K	Y	D	D	K	T	Q	R	K	E	N	D	T	E	M	E	Q	I	I	R	R	V	A	K	S	N	I	Q	I	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	.	.	.	.	.	.	.	.														T	T			B	G	G	G	T	B	S	S	S				T	T	T																				S	S			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.									280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	T	Q	G	E	T	A	Q	A	L	A	I	R	L	A	R	P	V	V	V	I	D	K	M	A	G	K	V	V	T	I	A	A	A	A	V	N	P	D	S	A	T	R	K	A	I	Y	Y	L	Q	Q	Q	G	K	T	V	L	Q	I	A	D	Y	P	G	M	L	I	W	R	T	V	A	M	I	I	N	E	A	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	D	Q	D	V	I	N	F	M	L	Y	P	T	V	N	E	G	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																															338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		403	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.				.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.		.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure										.																		.	.	.																												.
Query SS confidence										.																		.	.	.																												.
Query Sequence		D	A	L	Q	K	G	V	A	.	S	E	Q	D	I	D	T	A	M	R	L	G	V	N	Y	P	Y	.	.	.	G	P	L	A	W	G	A	Q	L	G	W	Q	R	I	L	R	L	L	E	N	L	Q	H	H	Y	G	E	.	E	R	Y	R	P	C	S	L	L	R	Q
Query Conservation										.																		.	.	.																												.
Alig confidence										.																		.	.	.																												.
Template Conservation
Template Sequence		R	C	I	E	E	G	V	I	S	N	E	S	L	I	D	I	M	F	I	L	G	F	G	W	P	I	H	S	G	G	P	M	R	F	G	K	T	E	G	L	D	K	I	A	N	M	L	V	H	W	S	S	L	E	P	K	E	S	A	Y	I	V	A	D	A	L	K	T
Template Known Secondary structure						T	T	S	S													T				S			T	T				B		S	S		B	S	S															T	T		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.