Job Description P76083 Confidence 99.86% Date Thu Jan 5 12:18:27 GMT 2012 Rank 18 Aligned Residues 218 % Identity 15% Template c3d1lB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative nadp oxidoreductase bf3122; PDBTitle: crystal structure of putative nadp oxidoreductase bf3122 from2 bacteroides fragilis Resolution 2.19 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		I	N	V	Q	T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	Q	V	L	.	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D	I	H	A
Query Conservation																																.
Alig confidence																																.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	D	T	P	I	V	L	I	G	A	G	N	L	A	T	N	L	A	K	A	L	Y	R	K	G	F	R	I	V	Q	V	Y	S	R	T	E	E	S	A	R	E	L	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	E	A	E	Y	T	T	D	L	A	E	V
Template Known Secondary structure		G	G	G									S													T	T									S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T					S		G	G	G	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																							50	.	.	.	.	.	.	.	.	.	60	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		L	A	A	A	D	L	V	I	E	A	A	S	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	A	E	I	K	N	P	E	R	V	A	G	L	H	F	F	N	P	A	P	V	M	K	L	V	E	.	V	V	S	G	L	A
Query Conservation																																																																											.
Alig confidence														.	.																																																												.
Template Conservation														.	.
Template Sequence		N	P	Y	A	K	L	Y	I	V	S	L	K	.	.	D	S	A	F	A	E	L	L	Q	G	I	V	E	G	K	R	E	E	A	L	X	V	H	T	A	G	S	I	P	X	N	V	W	E	G	H	V	P	H	Y	G	V	F	Y	P	X	Q	T	F	S	K	Q	R	E	V	D	F	K	E	I	P	F	F	I	E	A
Template Known Secondary structure			S			S								.	.													T	T			T	T								S	S	S		G	G	G	G	T	T	T		S	S								S			B	T	T	B				G	G	G
Template Predicted Secondary structure														.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.									.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.							.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Query Sequence		T	A	A	E	V	V	E	Q	L	C	E	L	T	L	S	W	G	K	Q	P	V	R	C	H	S	.	.	.	.	.	.	.	.	T	P	G	F	I	V	N	R	V	A	R	P	Y	Y	S	E	A	W	R	A	L	E	E	Q	V	A	A	P	E	V	I	D	A	A	L	R	D	G	A	.	.	.	.	.	.	G	F
Query Conservation																											.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.										.																														.	.	.	.	.	.
Template Conservation																																												.
Template Sequence		S	S	T	E	D	A	A	F	L	K	A	I	A	S	T	L	S	N	R	V	Y	D	A	D	S	E	Q	R	K	S	L	H	L	A	A	V	F	T	C	N	F	T	.	N	H	X	Y	A	L	A	A	E	L	L	K	K	Y	N	L	P	F	D	V	X	L	P	L	I	D	E	T	A	R	K	V	H	E	L	E	P
Template Known Secondary structure		S	S													T	T		S																									.														T	T			G	G	G	G														S
Template Predicted Secondary structure																																												.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		227				.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		P	.	.	.	M	G	P	L	E	L	T	D	L	I	G	Q	D	V	N	F	A	V
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		K	T	A	Q	T	G	P	A	I	R	Y	D	E	N	V	I	G	N	H	L	R	X
Template Known Secondary structure							S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions