Return to main results Retrieve Phyre Job Id

Job DescriptionP76083
Confidence99.11%DateThu Jan 5 12:18:27 GMT 2012
Rank117Aligned Residues145
% Identity19%Templatec3c7cB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:octopine dehydrogenase; PDBTitle: a structural basis for substrate and stereo selectivity in2 octopine dehydrogenase (odh-nadh-l-arginine)
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20....... ..30.........40.........50.........60.........70......... 80....
Predicted Secondary structure 



.















.

Query SS confidence 




















.



















































.




Query Sequence  TVAVIGSGTMGAGIAEVAASH. GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDI. HALAA
Query Conservation   
 




 

  

   
  .
  
 
 
     
      
   
      
             
      .  
  
Alig confidence 




















.























.


























.




Template Conservation 

 





 
 


  

   
  
 
                  .                      

 
  


  
Template Sequence  KVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGAD. ELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG
Template Known Secondary structure 

STTSTT

STTTTS.

TTS


SS
TT
Template Predicted Secondary structure 










.

























Template SS confidence 















































































   4.....10.........20.........30.........40......... 50.........60.........70.........80..
 
   85....90.........100.........110.........120.........130.. .......140.........150....
Predicted Secondary structure 

















..










Query SS confidence 















































. .





















Query Sequence  ADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEI. . KNPERVAGLHFFNPAPVMKLVE
Query Conservation 







 
 
  
  
   
        








 
  

   ..  
 
  
 


 
     


Alig confidence 








..




































..





















Template Conservation 





 

..
     

  


 
    


  

  
        
        
    
 
   
   
Template Sequence  ADVVILTVP. . AFAHEGYFQAMAPYVQDSALIVGLPSQAGFEFQCRDILGDKAAAVSMMSFETLPWACRIKE
Template Known Secondary structure 
S
S
..GGGTTT

TT
TT

SSGGGGGTSSS
S
Template Predicted Secondary structure 



..




















Template SS confidence 







































































   83......90. ........100.........110.........120.........130.........140.........150..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions