Job Description P76083 Confidence 99.68% Date Thu Jan 5 12:18:27 GMT 2012 Rank 39 Aligned Residues 200 % Identity 19% Template c2y0dB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: bcec mutation y10k Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.									.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.
Query Sequence		T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	.	.	.	.	.	.	.	.	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D
Query Conservation																																									.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	T	I	I	G	S	G	K	V	G	L	V	T	G	A	C	L	A	D	I	G	H	D	V	F	C	L	D	V	D	Q	A	K	I	D	I	L	N	N	G	G	V	P	I	H	E	P	G	L	K	E	V	I	A	R	N	R	S	A	G	R	.	.	.	.	.	.	.	.	.	.	.	.	L	R	F	S	T	D
Template Known Secondary structure									S												T	T	T								S									T	T	T			S	S			T	T											T	T	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.													.	.	.	.	.	.
		79		80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.
Predicted Secondary structure			.															.	.	.																																																		.	.	.	.	.	.	.
Query SS confidence			.															.	.	.																																																		.	.	.	.	.	.	.
Query Sequence		I	.	H	A	L	A	A	A	D	L	V	I	E	A	A	S	.	.	.	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	A	E	I	K	N	P	E	R	V	A	G	L	H	.	.	.	.	.	.	.	F	F	N	P	A
Query Conservation			.															.	.	.																																																		.	.	.	.	.	.	.
Alig confidence			.															.	.	.																									.																									.	.	.	.	.	.	.
Template Conservation																																													.
Template Sequence		I	E	A	A	V	A	H	G	D	V	Q	F	I	A	V	G	T	P	S	A	D	L	Q	Y	V	L	A	A	A	R	N	I	G	R	Y	M	T	G	F	K	V	I	V	.	D	K	S	T	V	P	V	G	T	A	E	R	V	R	A	A	V	A	E	E	L	A	K	R	G	G	Q	M	F	S	V	V	S	N	P	E
Template Known Secondary structure										S																													S						.			S				T	T															T	T	T
Template Predicted Secondary structure																																													.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.										.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.							.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.								.	.	.	.	.											.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.								.	.	.	.	.											.	.	.
Query Sequence		P	V	M	K	L	V	E	.	.	.	.	.	.	.	.	.	V	V	S	G	L	A	T	A	A	E	V	V	E	Q	L	C	E	L	T	L	S	W	.	.	.	.	.	.	G	K	Q	P	V	R	C	.	.	.	.	.	H	S	T	P	G	F	I	V	N	R	.	.	.	V	A	R	P	Y	Y	S	E	A	W	R
Query Conservation									.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.								.	.	.	.	.											.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.						.																	.	.	.	.	.	.								.	.	.	.	.											.	.	.
Template Conservation																							.
Template Sequence		F	L	K	E	G	A	A	V	D	D	F	T	R	P	D	R	I	V	I	G	C	.	D	D	D	V	P	G	E	R	A	R	E	L	M	K	K	L	Y	A	P	F	N	R	N	H	E	R	T	L	Y	M	D	V	R	S	A	E	F	T	K	Y	A	A	N	A	M	L	A	T	R	I	S	F	M	N	E	L	A	N
Template Known Secondary structure					T	T								S		S							.		S	S															G	G	G		S	S	S
Template Predicted Secondary structure																							.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	E	Q	V	A	A	P	E	V	I	D	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	D	R	F	G	A	D	I	E	A	V	R	R	G	I
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions