Job Description P76083 Confidence 98.02% Date Thu Jan 5 12:18:27 GMT 2012 Rank 199 Aligned Residues 146 % Identity 23% Template c2w2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:d-mandelate dehydrogenase; PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a. Resolution 1.85 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		Q	T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	.	V	A	A	S	H	G	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D	I	H	A	L	A	A
Query Conservation																			.
Alig confidence																			.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	V	L	G	A	V	G	L	G	A	I	Q	K	E	I	A	R	K	A	V	H	G	L	G	M	K	L	V	Y	Y	D	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	D	A	E	T	E	K	A	L	G	A	E	R	V	D	S	L	E	E	L	A	R	R
Template Known Secondary structure		S								S													T	T									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T					S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																								.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.								.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																							.	.	.												.													.	.	.	.	.	.	.
Query SS confidence																																							.	.	.												.													.	.	.	.	.	.	.
Query Sequence		A	D	L	V	I	E	A	A	S	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	.	.	.	S	I	S	I	T	A	I	A	A	E	I	.	K	N	P	E	R	V	A	G	L	H	F	F	.	.	.	.	.	.	.	N	P	A	P	V	M	K	L	V
Query Conservation																																							.	.	.												.													.	.	.	.	.	.	.
Alig confidence																																		.					.	.	.												.													.	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		S	D	C	V	S	V	S	V	P	Y	M	K	L	T	H	H	L	I	D	E	A	F	F	A	A	M	K	P	G	S	R	I	.	V	N	T	A	R	G	P	V	I	S	Q	D	A	L	I	A	A	L	K	S	G	K	L	L	S	A	G	L	D	V	H	E	F	E	P	N	V	S	K	E	L	I	E	M	K	H	V
Template Known Secondary structure			S									S	G	G	G	T	T		B								S		T	T				.				S		G	G	G	B											T	T	S							S	S		T	T	T	T	S							T	S	S	S
Template Predicted Secondary structure																																		.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		E	V	V	S	G	L	A	.	T	A	A	E	V	V	E	Q	L	C	E	L	T	L	S
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		T	L	T	T	H	I	G	G	V	A	I	E	T	F	H	E	F	E	R	L	T	M	T
Template Known Secondary structure					S	S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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