|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
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. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
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. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
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|
|  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
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|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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| . |
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| . |
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Query Sequence |   |
I | N | V | Q | T | V | A | V | I | G | S | G | T | M | G | A | G | I | A | E | V | A | A | S | H | G | . |
. |
H | Q | V | L | L | Y | D | I | S | A | E | A | L | T | R | A | I | D | G | . |
. |
. |
. |
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. |
I | H | A | R | L | N | S | R | V | T | R | G | K | L | T | A | E | T | C | E | R | T | L | K | R |
Query Conservation |   |
  |   |
|   |   |
|   |
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|   |
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|   |   |
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|   |   |   |
|   |   |
| . | . |   |   |
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . |
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| . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
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|   |
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|   |   |
|   |   |
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|   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |   |
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|   |   |
|   |   |
|   |   |
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|   |
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|   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
F | E | I | K | K | I | C | C | I | G | A | G | Y | V | G | G | P | T | C | S | V | I | A | H | M | C | P | E | I | R | V | T | V | V | D | V | N | E | S | R | I | N | A | W | N | S | P | T | L | P | I | Y | E | P | G | L | K | E | V | V | E | S | C | R | G | K | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|
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|  |  |  |  |  |
|
| S | T | T |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  | T | S | S | S |
| S | S |
|
| T | T |  |  |  |  |  |  |  |  | B | T | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
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  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
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  |
  |   |
73 | . | . | . | . | . | . | |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
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. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
. | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|
|  | . |  |  |  |
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|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  | . | . |  |  |  |  |  |  |
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|  |  |
Query SS confidence |   |
|
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| . |
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| . |
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| . |
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Query Sequence |   |
L | I | P | V | T | D | I | . |
H | A | L | A | A | A | D | L | V | I | E | A | A | S | E | . |
. |
. |
. |
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. |
R | L | E | V | K | K | A | L | F | A | Q | L | A | E | V | C | P | P | Q | T | L | L | T | T | N | T | S | S | I | S | I | . |
. |
T | A | I | A | A | E | I | K | N | P | E |
Query Conservation |   |
|   |   |   |   |   |   | . |   |   |
|   |   |
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|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
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|   |
| . | . |   |   |
|
|   |   |   |   |   |
|   |
Alig confidence |   |
|
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| . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . |
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|
| . | . |
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|
|
Template Conservation |   |
|   |   |
|
|   |   |   |
|
|   |   |   |
|
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
| . |
|   |   |
|
|
|
|   |
|
|   |   |   |
|   |   |   |
|
|   |   |
Template Sequence |   |
L | F | F | S | T | N | I | D | D | A | I | K | E | A | D | L | V | F | I | S | V | N | T | P | T | K | T | Y | G | M | G | K | G | R | A | A | D | L | K | Y | I | E | A | C | A | R | R | I | V | Q | N | S | N | G | Y | K | I | V | . |
T | E | K | S | T | V | P | V | R | A | A | E | S | I | R | R | I | F | D | A | N |
Template Known Secondary structure |   |
 |  |  |  | S |
|  |  |  |  |  |  |  |
| S |  |  |  |  |
|
|
|
|
| B |
| S | S | S | T | T | T | T | T | S | B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  | . |  |  |
| S |
|
|
| T | T |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
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  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
  |
  |   |
137 | . | . | 140 | . | . | . | |
|
|
. | . | . | . | . | . | 150 | . | . | . | . | |
|
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|
|
. | . | . | . | . | 160 | . | . | |
|
|
. | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 190 | . | . | |
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |
| . | . | . |
|
|
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|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . |  |  |
|
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|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . |  |  |  |  | . | . | . |
Query SS confidence |   |
|
|
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|
|
| . |
. |
. |
|
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|
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|
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|
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|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
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. |
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| . |
. |
. |
. |
. |
. |
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| . |
. |
. |
Query Sequence |   |
R | V | A | G | L | H | F | . |
. |
. |
F | N | P | A | P | V | M | K | L | V | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
V | V | S | G | L | A | T | A | . |
. |
. |
A | E | V | V | E | Q | L | C | E | L | T | L | S | W | G | K | Q | P | V | R | C | H | S | T | P | G | . |
. |
. |
. |
. |
. |
F | I | V | N | . |
. |
. |
Query Conservation |   |
|   |   |
|   |
|
| . | . | . |
|   |
|   |   |   |   |   |
|
|
| . | . | . | . | . | . | . | . | . |
|
|   |
|   |   |
|   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|   |
|   |
|
| . | . | . | . | . | . |
|
|   |
| . | . | . |
Alig confidence |   |
|
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|
| . | . | . |
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| . | . | . | . | . | . | . | . | . |
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| . | . | . |
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|
| . | . | . | . | . | . |
|
|
|
| . | . | . |
Template Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
Template Sequence |   |
T | K | P | N | L | N | L | Q | V | L | S | N | P | E | F | L | A | E | G | T | A | I | K | D | L | K | N | P | D | R | V | L | I | G | G | D | E | T | P | E | G | Q | R | A | V | Q | A | L | C | A | V | Y | E | H | W | V | P | R | E | K | I | L | T | T | N | T | W | S | S | E | L | S | K | L | A | A | N | A | F | L |
Template Known Secondary structure |   |
|
| T | T |
|  |  |  |  |  |  |
|
|
|
|
|
| T | T | S |  |  |  |  |  |  | S |
| S |
|  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
| G | G | G |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
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|
|  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
  |
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
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|
Query Sequence |   |
R | V | A | R | P | Y | Y | S | E | A | W | R | A | L | E | E | Q | V | A | A | P | E | V | I | D | A | A | L |
Query Conservation |   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|   |   |   |   |
|
|   |
|   |
Alig confidence |   |
|
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|
Template Conservation |   |
  |   |   |
|
|   |   |
|
|   |
|   |
|   |
|   |   |
|
|
|   |   |
|
|   |   |
|   |
Template Sequence |   |
A | Q | R | I | S | S | I | N | S | I | S | A | L | C | E | A | T | G | A | D | V | E | E | V | A | T | A | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
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