Job Description P76083 Confidence 99.34% Date Thu Jan 5 12:18:27 GMT 2012 Rank 94 Aligned Residues 194 % Identity 17% Template c2p4qA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase, decarboxylating 1; PDBTitle: crystal structure analysis of gnd1 in saccharomyces cerevisiae Resolution 2.37 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		M	M	I	N	V	Q	T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D	I	.
Query Conservation																																																																																	.
Alig confidence						.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation						.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	S	A	D	.	.	.	F	G	L	I	G	L	A	V	M	G	Q	N	L	I	L	N	A	A	D	H	G	F	T	V	C	A	Y	N	R	T	Q	S	K	V	D	H	F	L	A	N	E	A	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	I	I	G	A	T	S	I	E
Template Known Secondary structure					S	.	.	.							S													T	T								S	S	S									T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S					S	S
Template Predicted Secondary structure						.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.				.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																				.	50	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150
Predicted Secondary structure									.	.	.																																																												.						.	.	.	.	.
Query SS confidence									.	.	.																																																												.						.	.	.	.	.
Query Sequence		H	A	L	A	A	A	D	.	.	.	L	V	I	E	A	A	S	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	A	E	I	K	N	P	E	R	V	A	G	L	H	F	F	N	.	P	A	P	V	M	.	.	.	.	.
Query Conservation									.	.	.																																																												.						.	.	.	.	.
Alig confidence									.	.	.																	.																																			.	.							.						.	.	.	.	.
Template Conservation																												.																																			.	.
Template Sequence		D	F	I	S	K	L	K	R	P	R	K	V	M	L	L	V	K	A	G	A	P	V	D	A	L	I	.	N	Q	I	V	P	L	L	E	K	G	D	I	I	I	D	G	G	N	S	H	F	P	D	S	N	R	R	Y	E	E	L	K	K	K	.	.	G	I	L	F	V	G	S	G	V	S	G	G	E	E	G	A	R
Template Known Secondary structure						T	S		S	S									S	S								.				G	G	G			T	T							S																	T	.	.	T										S
Template Predicted Secondary structure																												.																																			.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
			151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.								.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.
Predicted Secondary structure		.																														.	.	.	.										.	.	.	.	.	.	.							.	.	.																.
Query SS confidence		.																														.	.	.	.										.	.	.	.	.	.	.							.	.	.																.
Query Sequence		.	K	L	V	E	V	V	S	G	L	A	T	A	A	E	V	V	E	Q	L	C	E	L	T	L	S	W	G	K	Q	.	.	.	.	P	V	R	C	H	S	T	P	G	.	.	.	.	.	.	.	F	I	V	N	R	V	.	.	.	A	R	P	Y	Y	S	E	A	W	R	A	L	E	E	Q	.	V	A	A	P	E
Query Conservation		.																														.	.	.	.										.	.	.	.	.	.	.							.	.	.																.
Alig confidence		.		.								.	.																			.	.	.	.										.	.	.	.	.	.	.							.	.	.																.
Template Conservation				.								.	.
Template Sequence		Y	G	.	P	S	L	M	P	G	G	.	.	S	E	E	A	W	P	H	I	K	N	I	F	Q	S	I	S	A	K	S	D	G	E	P	C	C	E	W	V	G	P	A	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	C	E	A	Y	D	I	M	K	R	L	G	G	F	T	D	K
Template Known Secondary structure				.								.	.		G	G	G												S				T	T			S							T	T																														T	T
Template Predicted Secondary structure				.								.	.
Template SS confidence
		136	.		.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		215	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	D	A	A	L	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	S	D	V	F	A	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions