Job Description P76083 Confidence 99.45% Date Thu Jan 5 12:18:27 GMT 2012 Rank 83 Aligned Residues 204 % Identity 18% Template c2o3jC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of caenorhabditis elegans udp-glucose dehydrogenase Resolution 1.88 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																											.	.																			.	.	.	.	.	.	.	.
Query SS confidence																											.	.																			.	.	.	.	.	.	.	.
Query Sequence		N	V	Q	T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	.	.	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	.	.	.	.	.	.	.	.	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L
Query Conservation																											.	.																			.	.	.	.	.	.	.	.
Alig confidence																											.	.																			.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	S	K	V	V	C	V	G	A	G	Y	V	G	G	P	T	C	A	M	I	A	H	K	C	P	H	I	T	V	T	V	V	D	M	N	T	A	K	I	A	E	W	N	S	D	K	L	P	I	Y	E	P	G	L	D	E	I	V	F	A	A	R	G	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure				S								S	T	T													T	T	S							S									T	S	S	S		S	S			T	T	T						T	T	B	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.														.
		74	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.														.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	P	V	T	D	I	.	H	A	L	A	A	A	D	L	V	I	E	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	A	E	I	K	N	P	E	R	V	A
Query Conservation								.															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.															.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																																																													.
Template Sequence		F	F	S	S	D	I	P	K	A	I	A	E	A	D	L	I	F	I	S	V	N	T	P	T	K	M	Y	G	R	G	K	G	M	A	P	D	L	K	Y	V	E	S	V	S	R	T	I	A	Q	Y	A	G	G	P	K	I	V	V	E	.	K	S	T	V	P	V	K	A	A	E	S	I	G	C	I	L	R	E	A	Q
Template Known Secondary structure					S										S										B		S	S	S	T	T	T	T	T	S	B		T													S			S							.		S				T	T											T	T
Template Predicted Secondary structure																																																													.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		140	.	.	.	.				.	.	.	.	.	150	.	.	.	.										.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.							.	190	.	.				.	.	.
Predicted Secondary structure							.	.	.											.	.	.	.	.	.	.	.	.										.	.	.																										.	.	.	.	.	.					.	.	.
Query SS confidence							.	.	.											.	.	.	.	.	.	.	.	.										.	.	.																										.	.	.	.	.	.					.	.	.
Query Sequence		G	L	H	F	F	.	.	.	N	P	A	P	V	M	K	L	V	E	.	.	.	.	.	.	.	.	.	V	V	S	G	L	A	T	A	A	.	.	.	E	V	V	E	Q	L	C	E	L	T	L	S	W	G	K	Q	P	V	R	C	H	S	T	P	G	.	.	.	.	.	.	F	I	V	N	.	.	.	R	V	A
Query Conservation							.	.	.											.	.	.	.	.	.	.	.	.										.	.	.																										.	.	.	.	.	.					.	.	.
Alig confidence							.	.	.											.	.	.	.	.	.	.	.	.										.	.	.																										.	.	.	.	.	.					.	.	.
Template Conservation
Template Sequence		K	L	K	F	Q	V	L	S	N	P	E	F	L	A	E	G	T	A	M	K	D	L	A	N	P	D	R	V	L	I	G	G	E	S	S	P	E	G	L	Q	A	V	A	E	L	V	R	I	Y	E	N	W	V	P	R	N	R	I	I	T	T	N	T	W	S	S	E	L	S	K	L	V	A	N	A	F	L	A	Q	R
Template Known Secondary structure																T	T								S		S								S	S																T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	Y	Y	S	E	A	W	R	A	L	E	E	Q	V	A	A	P	E	V	I	D	A	A	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	S	I	N	S	I	S	A	V	C	E	A	T	G	A	E	I	S	E	V	A	H	A	V	G
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions