Job Description P76083 Confidence 99.66% Date Thu Jan 5 12:18:27 GMT 2012 Rank 43 Aligned Residues 209 % Identity 11% Template c2i76B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein tm1727 from thermotoga maritima Resolution 3.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D	I	H	A	L	A	A	A	D	L
Query Conservation
Alig confidence																							.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	F	V	G	T	G	T	L	T	R	F	F	L	E	C	L	K	I	G	Y	.	.	.	.	I	L	S	R	S	I	D	R	A	R	N	L	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	G	G	K	A	A	T	L	E	K	H	P	E	V
Template Known Secondary structure								S	T	T													.	.	.	.	B			S	S									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T					T	T
Template Predicted Secondary structure																							.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.																											.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	E	A	A	S	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	A	E	I	K	N	P	E	R	V	A	G	L	H	F	F	N	P	A	P	V	M	K	L	V	E	V	V	S	G	L	A	T	A	A	E	V	V	E
Query Conservation
Alig confidence								.	.												.	.	.																							.	.
Template Conservation								.	.												.	.	.																							.	.
Template Sequence		V	F	V	I	V	P	.	.	D	R	Y	I	K	T	V	A	N	H	L	.	.	.	N	L	G	D	A	V	L	V	H	C	S	G	F	L	S	S	E	I	F	K	K	S	.	.	G	R	A	S	I	H	P	N	F	S	F	L	E	K	A	L	E	X	K	D	Q	I	V	F	G	L	E	G	D	E	R	G	L	P
Template Known Secondary structure						S		.	.									T	T	T	.	.	.			S	S								S	S	S		S	T	T	T		S	S	.	.	S								S				T	T	G	G	G		G	G	G									T	T
Template Predicted Secondary structure								.	.												.	.	.																							.	.
Template SS confidence
		60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.						190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.											.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.
Predicted Secondary structure																								.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.														.
Query SS confidence																								.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.														.
Query Sequence		Q	L	C	E	L	T	L	S	W	G	K	Q	P	V	R	C	H	S	T	P	G	F	.	.	.	.	.	I	V	N	R	V	A	R	P	Y	Y	S	E	A	W	R	A	L	E	E	Q	V	A	A	P	E	V	.	.	.	.	.	.	.	.	.	.	I	D	A	A	L	R	D	G	A	G	F	P	M	.	G	P	L
Query Conservation																								.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.														.
Alig confidence																								.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		I	V	K	K	I	A	E	E	I	S	G	K	Y	F	V	I	E	K	K	K	A	Y	H	L	A	A	V	I	A	S	N	F	P	V	A	L	A	Y	L	S	K	R	I	Y	T	L	L	G	L	D	E	P	E	L	L	I	H	T	L	X	K	G	V	A	D	N	I	K	K	X	R	V	E	C	S	L	T	G	P	V
Template Known Secondary structure											S	S																				T																T	T		S																				S								S
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	T	D	L	I	G	Q	D	V	N	F	A	V	T	C	S	V	F	N	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	G	D	W	Q	V	V	E	E	E	R	R	E	Y	E	K	I	F	G	N	T
Template Known Secondary structure																				S	S		S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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