Job Description P76083 Confidence 99.70% Date Thu Jan 5 12:18:27 GMT 2012 Rank 37 Aligned Residues 253 % Identity 17% Template c2gf2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; PDBTitle: crystal structure of human hydroxyisobutyrate dehydrogenase Resolution 2.38 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D	I	.	H	A	L	A	A	A
Query Conservation																																																																											.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	G	F	I	G	L	G	N	M	G	N	P	M	A	K	N	L	M	K	H	G	Y	P	L	I	I	Y	D	V	F	P	D	A	C	K	E	F	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	E	Q	V	V	S	S	P	A	D	V	A	E	K	A
Template Known Secondary structure									S	T	T											T	T								S	S	T								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80																									.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure													.	.																																		.	.	.
Query SS confidence													.	.																																		.	.	.
Query Sequence		D	L	V	I	E	A	A	S	E	R	L	.	.	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	.	.	.	A	E	I	K	N	P	E	R	V	A	G	L	H	F	F	N	P	A	P	V	M	K	L	V	E	V	V	S	G	L	A
Query Conservation													.	.																																		.	.	.
Alig confidence													.	.																																		.	.	.
Template Conservation
Template Sequence		D	R	I	I	T	M	L	P	T	S	I	N	A	I	E	A	Y	S	G	A	N	G	I	L	K	K	V	K	K	G	S	L	L	I	D	S	S	T	I	D	P	A	V	S	K	E	L	A	K	E	V	E	K	M	G	A	V	F	M	D	A	P	V	S	G	G	V	G	A	A	R	S	G	N	L	T	F	M	V	G
Template Known Secondary structure		S							S	S										S	T	T		G	G	G	T			T	T							S																	T	T										S								T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																														.	.	.	.	.										.	.	.
Query SS confidence																														.	.	.	.	.										.	.	.
Query Sequence		T	A	A	E	V	V	E	Q	L	C	E	L	T	L	S	W	G	K	Q	P	V	R	C	H	S	T	P	G	.	.	.	.	.	F	I	V	N	R	V	A	R	P	.	.	.	Y	Y	S	E	A	W	R	A	L	E	E	Q	V	A	A	P	E	V	I	D	A	A	L	R	D	G	A	G	F	P	M	G	P	L	E
Query Conservation																														.	.	.	.	.										.	.	.
Alig confidence																														.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		G	V	E	D	E	F	A	A	A	Q	E	L	L	G	C	M	G	S	N	V	V	Y	C	G	A	V	G	T	G	Q	A	A	K	I	C	N	N	M	L	L	A	I	S	M	I	G	T	A	E	A	M	N	L	G	I	R	L	G	L	D	P	K	L	L	A	K	I	L	N	M	S	S	G	R	C	W	S	S	D	T
Template Known Secondary structure		S		G	G	G									T	T	T									S	T	T																														T	T													S	T	T							T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		233	.	.	.	.	.																	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	D	L	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	V	N	F	A	V	T	C	S	V	F	N	A	F	W	Q	E	R	R	F	L	P	S	L	V	Q	Q	E	L	V	I	G	G	R	L	G	K	K	S	G	L	G	V	Y	D	W
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																																								.	.
Template Sequence		Y	N	P	V	P	G	V	M	D	G	V	P	S	A	N	N	Y	Q	G	G	F	G	T	T	L	M	A	K	D	L	G	L	A	Q	D	S	A	T	.	.	S	T	K	S	P	I	L	L	G	S	L	A	H	Q	I	Y	R	M	M	C	A	K	G	Y	S	K	K	D	F
Template Known Secondary structure		S		S	S	T	T	T	S	S	S	S	G	G	G	G	T	T		S	S	S	B																	.	.		T	T																		T	T	T		T	T	S	B	G
Template Predicted Secondary structure																																								.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions