Job Description P76083 Confidence 99.03% Date Thu Jan 5 12:18:27 GMT 2012 Rank 122 Aligned Residues 128 % Identity 24% Template c2fnzA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lactate dehydrogenase; PDBTitle: crystal structure of the lactate dehydrogenase from cryptosporidium2 parvum complexed with cofactor (b-nicotinamide adenine dinucleotide)3 and inhibitor (oxamic acid) Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		M	I	N	V	Q	T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	.	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D	I	H
Query Conservation																														.
Alig confidence																														.																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	I	E	R	R	K	I	A	V	I	G	S	G	Q	I	G	G	N	I	A	Y	I	V	G	K	D	N	L	A	D	V	V	L	F	D	I	A	E	G	I	P	Q	G	K	A	L	D	I	T	H	S	M	V	M	F	G	S	T	S	K	.	.	.	.	.	.	.	.	.	.	.	.	V	I	G	T	N	D	Y	A
Template Known Secondary structure														S														T		S							S	S	S	S																	T					.	.	.	.	.	.	.	.	.	.	.	.							G	G
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.													.	.	.	80	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.															.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																			.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																			.
Query Sequence		A	L	A	A	A	D	L	V	I	E	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	.	T	N	T	S	S	I	S	I	T	A	I	A	A	E	I	K	N	P	.	E	R	V	A	G	L
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																			.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																			.
Template Conservation
Template Sequence		D	I	S	G	S	D	V	V	I	I	T	A	S	I	P	G	R	P	K	D	D	R	S	E	L	L	F	G	N	A	R	I	L	D	S	V	A	E	G	V	K	K	Y	C	P	N	A	F	V	I	C	I	T	N	P	L	D	V	M	V	S	H	F	Q	K	V	S	G	L	P	H	N	K	V	C	G	M
Template Known Secondary structure		G	G	T	T		S									S	S			S	S		G	G	G	G																				T	T	S							S	S																G	G	G
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions