Job Description P76083 Confidence 97.21% Date Thu Jan 5 12:18:27 GMT 2012 Rank 269 Aligned Residues 128 % Identity 23% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		N	V	Q	T	V	A	V	I	G	S	G	T	M	G	A	.	G	I	A	E	V	A	A	S	H	G	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D	I	H	A	L
Query Conservation																	.
Alig confidence																	.																						.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	R	H	I	H	F	V	G	I	G	G	A	G	X	G	G	I	A	E	V	L	A	N	E	G	Y	Q	I	S	G	S	D	L	A	P	N	.	.	.	.	.	.	.	.	.	.	P	V	T	Q	Q	L	X	N	L	G	.	.	.	.	.	.	.	.	.	.	.	A	T	I	Y	F	N	H	R	P	E	N	V
Template Known Secondary structure		T								T	T	T	S	T	T											T	T								S	S			.	.	.	.	.	.	.	.	.	.									T	T	.	.	.	.	.	.	.	.	.	.	.					S	S			G	G	G	G
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.											.	.	.	.	.	60	.	.	.	.												.	.	.	.	.	70	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.											.	.	.	.	110	.	.	.	.	.	.	.								.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure											.	.															.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Query SS confidence											.	.															.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Query Sequence		A	A	A	D	L	V	I	E	A	.	.	A	S	E	R	L	E	V	K	K	A	L	F	A	Q	.	.	.	.	.	.	.	.	.	.	L	A	E	V	C	P	P	Q	T	L	L	T	.	.	.	.	.	.	.	T	N	T	S	S	I	S	I	T	A	I	A	A	E	I	K	N	P	E	R	V	A	G	L	H	F
Query Conservation											.	.															.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Alig confidence											.	.															.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	A	S	V	V	V	V	S	S	A	I	S	A	D	N	P	E	I	V	A	A	H	E	A	R	I	P	V	I	R	R	A	E	X	L	A	E	L	X	R	F	R	H	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	X	V	S	S	I	Y	A	E	A	G	L	D	P	T	F	V	N	G	G	L	V
Template Known Secondary structure		T	T		S						T	T			T	T										T	T															T	T	S							S	S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	P	A	P	V	M	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	A	G	V	H	A	R	L
Template Known Secondary structure		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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