Job Description P76083 Confidence 100.00% Date Thu Jan 5 12:18:27 GMT 2012 Rank 8 Aligned Residues 259 % Identity 33% Template c1zejA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxyacyl-coa dehydrogenase; PDBTitle: crystal structure of the 3-hydroxyacyl-coa dehydrogenase (hbd-9,2 af2017) from archaeoglobus fulgidus dsm 4304 at 2.00 a resolution Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D	I	H	A	L	A	A	A	D
Query Conservation
Alig confidence																					.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	F	V	I	G	A	G	L	X	G	R	G	I	A	I	A	I	A	.	S	K	H	E	V	V	L	Q	D	V	S	E	K	A	L	E	A	A	R	E	Q	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	L	L	S	K	I	E	F	T	T	T	L	E	K	V	K	D	C	D
Template Known Secondary structure									S												.	T	T	S							S												S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	G	G					S	S		T	T	G	G	G		S
Template Predicted Secondary structure																					.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	I	E	A	A	S	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	A	E	I	K	N	P	E	R	V	A	G	L	H	F	F	N	P	A	P	V	M	K	L	V	E	V	V	S	G	L	A	T	A	A	E	V	V
Query Conservation
Alig confidence																										.	.
Template Conservation																										.	.
Template Sequence		I	V	X	E	A	V	F	E	D	L	N	T	K	V	E	V	L	R	E	V	E	R	L	T	.	.	N	A	P	L	C	S	N	T	S	V	I	S	V	D	D	I	A	E	R	L	D	S	P	S	R	F	L	G	V	H	W	X	N	P	P	H	V	X	P	L	V	E	I	V	I	S	R	F	T	D	S	K	T	V
Template Known Secondary structure									S														T	T		.	.		S							S	S	S							T	T	S	S		G	G	G								S	S	T	T	T										T	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		E	Q	L	C	E	L	T	L	S	W	G	K	Q	P	V	R	C	H	S	T	P	G	F	I	V	N	R	V	A	R	P	Y	Y	S	E	A	W	R	A	L	E	E	Q	V	A	A	P	E	V	I	D	A	A	L	R	D	G	A	G	F	.	.	.	P	M	G	P	L	E	L	T	D	L	I	G	Q	D	V	N	F
Query Conservation																																																														.	.	.
Alig confidence																				.	.																										.															.	.	.
Template Conservation																				.	.																										.
Template Sequence		A	F	V	E	G	F	L	R	E	L	G	K	E	V	V	V	C	K	.	.	G	Q	S	L	V	N	R	F	N	A	A	V	L	S	E	A	S	R	X	I	E	E	G	V	R	.	A	E	D	V	D	R	V	W	K	H	H	L	G	L	L	Y	T	L	F	G	P	L	G	N	L	D	Y	I	G	L	D	V	A	Y
Template Known Secondary structure											T	T								.	.	S	S																					T			.										T	T
Template Predicted Secondary structure																				.	.																										.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	T	C	S	V	F	N	A	F	W	Q	E	R	R	F	L	P	S	L	V	Q	Q	E	L	V	I	G	G	R	L	G	K	K	S	G	L	G	V	Y	D	W	R	A	E	R
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		Y	A	S	L	Y	L	Y	K	R	F	G	D	.	E	K	F	K	P	P	E	W	L	Q	E	K	I	K	K	G	E	V	G	V	K	A	G	K	G	I	Y	E	Y	G	P	K	A
Template Known Secondary structure														.	G	G	G	S											T	T			B	G	G	G	T	B	S	S	S	B			T	T
Template Predicted Secondary structure														.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions