Job Description P76083 Confidence 98.07% Date Thu Jan 5 12:18:27 GMT 2012 Rank 187 Aligned Residues 127 % Identity 18% Template c1wziA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: structural basis for alteration of cofactor specificity of2 malate dehydrogenase from thermus flavus Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.								30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure														.																	.	.	.	.	.	.	.
Query SS confidence														.																	.	.	.	.	.	.	.
Query Sequence		M	I	N	V	Q	T	V	A	V	I	G	S	.	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	.	.	.	.	.	.	.	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L
Query Conservation														.																	.	.	.	.	.	.	.
Alig confidence														.																	.	.	.	.	.	.	.												.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.																				.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	A	P	V	R	V	A	V	T	G	A	A	G	Q	I	G	Y	S	L	L	F	R	I	A	A	G	E	M	L	G	K	D	Q	P	V	I	L	Q	L	L	G	S	E	R	S	F	.	Q	A	L	E	G	V	V	M	E	L	E	D	C	A	F	P	L	L	A	.	.	.	.	.	.	.	.	.	.	G	L	E
Template Known Secondary structure											S	S	T	T	S												T	T	T	T	T		T	T											T	T	T		.												T	T	T		T	T			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.											.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.															.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Query Sequence		I	P	V	T	D	I	H	A	L	A	A	A	D	L	V	I	E	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	A	E	I	K	N	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.												.	.	.	.	.
Template Conservation																																																																.	.
Template Sequence		A	T	D	D	P	K	V	A	F	K	D	A	D	Y	A	L	L	V	G	A	A	P	R	K	A	G	M	E	R	R	D	L	L	Q	V	N	G	K	I	F	T	E	Q	G	R	A	L	A	E	V	A	K	K	D	V	K	V	L	V	V	G	N	.	.	P	A	N	T	N	A	L	I	A	Y	K	N	A	P	G	L
Template Known Secondary structure				S						T	T	T		S												S	S																									S		T	T							S	S	.	.	S											T		T	T	S
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		135	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	R	V	A	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	P	R	N	F	T	A
Template Known Secondary structure			G	G	G
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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