Job Description P76083 Confidence 99.65% Date Thu Jan 5 12:18:27 GMT 2012 Rank 45 Aligned Residues 200 % Identity 18% Template c1mv8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa Resolution 1.55 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.
Query Sequence		T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	.	.	.	.	.	.	.	.	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D
Query Conservation																																										.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	S	I	F	G	L	G	Y	V	G	A	V	C	A	G	C	L	S	A	R	G	H	E	V	I	G	V	D	V	S	S	T	K	I	D	L	I	N	Q	G	K	S	P	I	V	E	P	G	L	E	A	L	L	Q	Q	G	R	Q	T	G	R	.	.	.	.	.	.	.	.	.	.	.	.	L	S	G	T	T	D
Template Known Secondary structure									S	T	T											T	T								S										T	T			S	S			T	T											T	T		.	.	.	.	.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.													.	.	.	.	.	.
		79		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.									.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure			.																.	.	.	.	.	.	.	.																					.	.	.
Query SS confidence			.																.	.	.	.	.	.	.	.																					.	.	.
Query Sequence		I	.	H	A	L	A	A	A	D	L	V	I	E	A	A	S	E	.	.	.	.	.	.	.	.	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	.	.	.	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	A	E	I	K	N	P	E	R	V	A	G	L	H	F	F	N	P
Query Conservation			.																.	.	.	.	.	.	.	.																					.	.	.
Alig confidence			.																.	.	.	.	.	.	.	.																					.	.	.
Template Conservation
Template Sequence		F	K	K	A	V	L	D	S	D	V	S	F	I	C	V	G	T	P	S	K	K	N	G	D	L	D	L	G	Y	I	E	T	V	C	R	E	I	G	F	A	I	R	E	K	S	E	R	H	T	V	V	V	R	S	T	V	L	P	G	T	V	N	N	V	V	I	P	L	I	E	D	C	S	G	K	K	A	G	V	D
Template Known Secondary structure								T		S										B		T	T	S	S	B																	T	T			S								S				T	T					T										S			B	T	T	T
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.																		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.											.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.											.	.	.
Query Sequence		A	P	V	M	K	L	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	S	G	L	A	T	A	A	E	V	V	E	Q	L	C	E	L	T	L	S	W	G	K	Q	P	V	R	C	.	.	.	.	H	S	T	P	G	F	I	V	N	R	.	.	.	V	A	R	P	Y	Y	S	E	A
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.											.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.																							.	.	.	.											.	.	.
Template Conservation																																.	.
Template Sequence		F	G	V	G	T	N	P	E	F	L	R	E	S	T	A	I	K	D	Y	D	F	P	P	M	T	V	I	G	E	L	.	.	D	K	Q	T	G	D	L	L	E	E	I	Y	R	E	L	D	A	P	I	I	R	K	T	V	E	V	A	E	M	I	K	Y	T	C	N	V	W	H	A	A	K	V	T	F	A	N	E	I
Template Known Secondary structure		B											T	T	S							S		S							S	.	.	S												T	T	S	S	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	A	L	E	E	Q	V	A	A	P	E	V	I	D	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	I	A	K	A	V	G	V	D	G	R	E	V	M	D	V	I
Template Known Secondary structure								T	T	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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