Job Description P76083 Confidence 96.62% Date Thu Jan 5 12:18:27 GMT 2012 Rank 362 Aligned Residues 96 % Identity 21% Template c1j6uA_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate-alanine ligase murc; PDBTitle: crystal structure of udp-n-acetylmuramate-alanine ligase2 murc (tm0231) from thermotoga maritima at 2.3 a resolution Resolution 2.30 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		Q	T	V	A	V	I	G	S	G	T	M	G	A	.	G	I	A	E	V	A	A	S	H	G	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D	I	H	A	L	A	A
Query Conservation															.
Alig confidence															.																						.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	I	H	F	V	G	I	G	G	I	G	X	S	A	V	A	L	H	E	F	S	N	G	N	D	V	Y	G	S	N	I	E	E	T	.	.	.	.	.	.	.	.	.	.	E	R	T	A	Y	L	R	K	L	G	.	.	.	.	.	.	.	.	.	.	.	I	P	I	F	V	P	H	S	A	D	N	W	Y	D
Template Known Secondary structure								T	T	T	S													T	T								S	S			.	.	.	.	.	.	.	.	.	.									T	T	.	.	.	.	.	.	.	.	.	.	.					S	S			T	T	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.											.	.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100													.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure										.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	L	V	I	E	A	A	.	.	.	S	E	R	L	E	V	K	K	.	.	.	.	.	.	.	.	.	.	.	.	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S
Query Conservation										.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	D	L	V	I	K	T	P	A	V	R	D	D	N	P	E	I	V	R	A	R	X	E	R	V	P	I	E	N	R	L	H	Y	F	R	D	T	L	K	R	E	K	K	E	E	F	A	V	T	G	T	D	G
Template Known Secondary structure			S						T	T			T	T										T	T																											S	S	S
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions