Job Description P76083 Confidence 99.33% Date Thu Jan 5 12:18:27 GMT 2012 Rank 97 Aligned Residues 199 % Identity 19% Template c1dliA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: the first structure of udp-glucose dehydrogenase (udpgdh) reveals the2 catalytic residues necessary for the two-fold oxidation Resolution 2.31 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.
Predicted Secondary structure																																										.	.	.	.																																		.
Query SS confidence																																										.	.	.	.																																		.
Query Sequence		T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	.	.	.	.	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D	I	.	H	A
Query Conservation																																										.	.	.	.																																		.
Alig confidence																					.																					.	.	.	.															.	.	.	.	.	.	.	.	.	.										.
Template Conservation																					.																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	A	V	A	G	S	G	Y	V	G	L	S	L	G	V	L	L	S	.	L	Q	N	E	V	T	I	V	D	I	L	P	S	K	V	D	K	I	N	N	G	L	S	P	I	Q	D	E	Y	I	E	Y	Y	L	K	S	K	Q	.	.	.	.	.	.	.	.	.	.	L	S	I	K	A	T	L	D	S	K	A	A
Template Known Secondary structure									S											T	.	T	T	S							S										T	T			S	S												S		.	.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure																					.																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.											.	60	.	.	.	.	.	.	.	.	.	70
		82	.	.	.	.	.	.	.	90	.	.	.	.										.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.
Query Sequence		L	A	A	A	D	L	V	I	E	A	A	S	E	.	.	.	.	.	.	.	.	.	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	A	E	I	K	N	P	E	R	V	A	G	L	H	F	F	N	P	A	P	V	M	K	L
Query Conservation															.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																																														.	.	.	.
Template Conservation																																																																					.	.	.	.
Template Sequence		Y	K	E	A	E	L	V	I	I	A	T	P	T	N	Y	N	S	R	I	N	Y	F	D	T	Q	H	V	E	T	V	I	K	E	V	L	S	V	N	S	H	A	T	L	I	I	K	S	T	I	P	I	G	F	I	T	E	M	R	Q	K	F	Q	T	D	R	I	I	.	.	.	.	F	S	P	E	F	L	R	E	S
Template Known Secondary structure						S												T	T	T	T																			S	S							S				T	T										T		S				.	.	.	.								T	T
Template Predicted Secondary structure																																																																					.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.
													153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.							.	.	.	180	.	.	.	.	.	.	.	.	.									190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.														.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.														.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	V	E	V	V	S	G	L	A	T	A	A	E	V	V	E	Q	L	C	E	L	T	L	S	W	.	.	.	.	.	.	G	K	Q	P	V	R	C	H	S	T	P	G	F	.	.	.	.	.	.	.	.	I	V	N	R	V	A	R	P	Y	Y	S	E	A	W	R	A	L	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.														.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	L	Y	D	N	L	Y	P	S	R	I	I	V	S	C	E	E	N	D	S	P	K	V	K	A	D	A	E	K	F	A	L	L	L	K	S	A	A	K	K	N	N	V	P	V	L	I	M	G	A	S	E	A	E	A	V	K	L	F	A	N	T	Y	L	A	L	R	V	A	Y	F	N	E	L	D	T	Y	A	E
Template Known Secondary structure		S	T	T					S		S								T	T	S																				S	S	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	V	A	A	P	E	V	I	D	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	K	L	N	S	H	M	I	I	Q	G	I
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions