Job Description P0AGM5 Confidence 99.79% Date Thu Jan 5 11:29:31 GMT 2012 Rank 16 Aligned Residues 178 % Identity 8% Template d1d8da_ SCOP info alpha-alpha superhelix Protein prenylyltransferase Protein prenylyltransferase Resolution 2.00

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		F	Y	G	D	W	G	F	K	A	S	R	G	V	Y	R	L	S	D	A	L	W	L	D	Q	V	L	K	N	R	Q	G	S	A	V	S	L	G	A	V	L	L	W	V	A	N	R	L	D	.	L	P	L	L	P	V	I	F	P	T	Q	L	I	L	R	I	E	C	P	D	G	E	I	W	L	I	N	P	F	N	G
Query Conservation																																																		.
Alig confidence																																																		.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	D	Y	F	R	A	V	L	Q	R	D	E	R	S	E	R	A	F	K	L	T	R	D	A	I	E	L	N	A	A	N	Y	T	V	W	H	F	R	R	V	L	L	R	S	L	Q	K	D	L	Q	E	E	M	N	Y	I	I	A	I	I	E	E	Q	P	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T			S															T	T															T	T																		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	L	S	E	H	M	L	D	V	W	L	K	G	N	I	S	P	S	A	E	L	F	Y	E	D	L	D	E	A	D	N	I	E	V	I	R	K	L	L	D	T	L	K	A	S	L	M	E	E	N	Q	M	E	L	A	L	R	T	S	E	A	L	L	Q	F	N	P	E	D	P	Y	E	I	R	D	R	G	L	I
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	Y	Q	V	W	H	H	R	R	V	L	V	E	W	L	K	D	P	S	Q	E	L	E	F	I	A	D	I	L	N	Q	D	A	K	N	Y	H	A	W	Q	H	R	Q	W	V	I	Q	E	F	R	L	W	D	N	E	L	Q	Y	V	D	Q	L	L	K	E	D	V	R	N	N	S	V	W	N	Q	R	H	F	V
Template Known Secondary structure		.	.															T			T	T													T	T																T			T	T													T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		225	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		Y	A	Q	L	D	C	.	.	.	.	.	.	E	H	V	A	L	N	D	L	S	Y	F	V	E	Q	C	P	E	D	P	I	S	E	M	I	R	A	Q	I
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	N	T	T	G	Y	S	D	R	A	V	L	E	R	E	V	Q	Y	T	L	E	M	I	K	L	V	P	H	N	E	S	A	W	N	Y	L	K	G	I
Template Known Secondary structure					T	T		S		S																		S	T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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