Job Description P0AGM5 Confidence 37.16% Date Thu Jan 5 11:29:31 GMT 2012 Rank 141 Aligned Residues 47 % Identity 6% Template c3snxB_ PDB info PDB header:sugar binding protein Chain: B: PDB Molecule:putative susd-like carbohydrate binding protein; PDBTitle: crystal structure of a putative susd-like carbohydrate binding protein2 (bt_1439) from bacteroides thetaiotaomicron vpi-5482 at 1.88 a3 resolution Resolution 1.88 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.														.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	L	A	L	R	T	S	E	A	L	L	Q	F	N	P	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	E	I	R	D	R	G	L	I	Y	A	Q	L	D	C	E	H	V	A	L	N	D	L	S	Y	F	V	E
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Q	Q	I	F	D	D	L	N	L	A	Q	D	Y	L	T	N	Y	V	R	K	G	D	G	Q	K	F	K	P	N	T	D	V	V	N	G	L	X	A	R	A	Y	L	L	T	G	Q	W	G	E	A	A	K	A	A	E	A	A	R	K
Template Known Secondary structure																T	T	T					S	G	G	G	T	T	S																	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions