Job Description P0AGM5 Confidence 80.81% Date Thu Jan 5 11:29:31 GMT 2012 Rank 125 Aligned Residues 78 % Identity 13% Template c3mkqA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:coatomer beta'-subunit; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.									.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.
Query Sequence		N	I	S	P	S	A	E	L	F	Y	E	D	L	D	E	A	D	N	I	E	V	I	R	K	L	L	D	T	L	K	A	S	L	M	E	E	N	Q	M	E	L	A	L	R	T	S	E	A	.	.	.	.	.	.	.	.	L	L	Q	F	N	P	E	D	P	Y	E	I	R	D	R	G	L	I	Y	A	Q	L	D	C
Query Conservation																																																		.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		K	V	G	Q	L	T	L	A	R	D	L	L	T	D	E	S	A	.	.	.	.	.	E	M	K	W	R	A	L	G	D	A	S	L	Q	R	F	N	F	K	L	A	I	E	A	F	T	N	A	H	D	L	E	S	L	F	L	L	H	S	S	F	N	N	K	E	G	L	V	T	L	A	K	D	A	E	T	T	G	K
Template Known Secondary structure				T										T	T				.	.	.	.	.														T	T													T												T	T															T	T
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		664	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680						.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	V	A	L	N	D	L	S	Y	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	N	L	A	F	N	A	Y	W	I	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		739	740	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions