Job Description P0AGM5 Confidence 61.34% Date Thu Jan 5 11:29:31 GMT 2012 Rank 131 Aligned Residues 47 % Identity 15% Template c3lewA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:susd-like carbohydrate binding protein; PDBTitle: crystal structure of susd-like carbohydrate binding protein2 (yp_001298396.1) from bacteroides vulgatus atcc 8482 at 1.70 a3 resolution Resolution 1.70 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.												.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	L	A	L	R	T	S	E	A	L	L	Q	F	N	P	E	D	.	.	.	.	.	.	.	.	.	.	.	P	Y	E	I	R	D	R	G	L	I	Y	A	Q	L	D	C	E	H	V	A	L	N	D	L	S	Y	F	V	E
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	A	Q	S	I	N	D	L	E	E	A	L	E	L	I	P	E	T	Y	V	R	D	A	K	H	K	I	D	N	E	V	V	L	G	I	L	S	R	A	C	L	Y	A	R	Q	W	E	K	A	K	T	Y	S	D	K	L	L	A
Template Known Secondary structure																S		T	T				S	S	T	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions