Job Description P0AGM5 Confidence 99.01% Date Thu Jan 5 11:29:31 GMT 2012 Rank 93 Aligned Residues 229 % Identity 13% Template c3ceqB_ PDB info PDB header:motor protein, transport protein Chain: B: PDB Molecule:kinesin light chain 2; PDBTitle: the tpr domain of human kinesin light chain 2 (hklc2) Resolution 2.75 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																		.	.	.	.	.	70
Predicted Secondary structure																		.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	K	A	P	L	C	E	G	M	I	L	A	C	E	A	I	.	.	R	R	D	F	P	S	Q	D	V	Y	D	E	L	E	R	L	V	S	L	A	K	E	E	I	S	Q	L	L	P	L	E	E	Q	L	E	K	L	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	Y	G	D	W
Query Conservation																		.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	V	P	L	C	K	Q	A	L	E	D	L	E	K	T	S	G	H	D	H	P	D	V	A	T	M	L	N	I	L	A	L	V	Y	R	D	Q	N	K	Y	K	E	A	A	H	L	L	N	D	A	L	A	I	R	E	K	T	L	G	K	D	H	P	A	V	A	A	T	L	N	N	L	A	V	L	Y	G	K	R
Template Known Secondary structure		T																		S	S	S																	T	T																						T	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	K	A	S	R	G	V	Y	R	L	S	D	A	L	W	L	D	Q	V	L	K	N	R	Q	G	S	A	V	S	L	G	A	V	L	L	W	V	A	N	R	L	D	L	P	L	L	P	V	I	F	P	T	Q	L	I	L	R	I	E	C	P	D	G	E	I	W	L	I	N	P	F	N	G	E	S	L	S	E	H
Query Conservation
Alig confidence																																																											.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.
Template Sequence		G	K	Y	K	E	A	E	P	L	C	K	R	A	L	E	I	R	E	K	V	L	G	K	F	H	P	D	V	A	K	Q	L	S	N	L	A	L	L	C	Q	N	Q	G	K	A	E	E	V	E	Y	Y	Y	R	R	A	L	E	.	.	.	.	.	.	I	Y	A	T	R	L	G	P	D	D	P	N	V	A	K	T	K
Template Known Secondary structure		T																						T	T																	T	T	T															.	.	.	.	.	.						S		T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.							.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	D	V	W	L	K	G	N	I	S	P	S	A	E	L	F	Y	E	D	L	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	N	I	E	V	I	R	K	L	L	D	T	L	K	A	S	L	M	E	E	N	Q	M	E	L	A	L	R	T	S	E	A	L	L	Q	F	N	P	E	D	P
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	N	L	A	S	C	Y	L	K	Q	G	K	Y	Q	D	A	E	T	L	Y	K	E	I	L	T	R	A	H	E	K	E	F	G	S	V	N	G	D	N	K	P	I	W	M	H	A	E	E	R	E	E	S	K	D	K	R	R	D	S	A	P	Y	G	E	Y	G	S	W	Y	K	A	C	K	V	D	S	P	T	V	N
Template Known Secondary structure												T																							S			S	S	S													T	T					S	S	S		S	S	S	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	I	R	D	R	G	L	I	Y	A	Q	L	D	C	E	H	V	A	L	N	D	L	S	Y	F	V	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	L	R	S	L	G	A	L	Y	R	R	Q	G	K	L	E	A	A	H	T	L	E	D	C	A	S	R	N
Template Known Secondary structure														T	T															T
Template Predicted Secondary structure
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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